PlantSME Plant secondary metabolism enzyme database

Bonia amplexicaulis (bonia_amplexicaulis)

Imported from atlas release summary for Bonia amplexicaulis.

2193
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 621 20 BAHD (247) View species results
Phenylpropanoid pathway 530 12 POD (270) View species results
Alkaloid pathway 443 24 7DLGT (85) View species results
Flavonoid pathway 283 12 UFGT (173) View species results
Rosmarinic acid pathway 196 7 C4H (82) View species results
Steroid pathway 120 13 SMT1/SMT2/SMT3 (51) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1655 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 469 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Gene Pathway Family Confidence Status
BOampscaffold1930144780 Flavonoid C4H medium pass
BOampscaffold20380158050 Flavonoid C4H medium borderline
BOampscaffold2040158920 Flavonoid C4H medium borderline
BOampscaffold2100172820 Flavonoid C4H medium borderline
BOampscaffold2620210680 Flavonoid C4H low borderline
BOampscaffold3230264280 Flavonoid C4H medium borderline
BOampscaffold3980303030 Flavonoid C4H medium borderline
BOampscaffold4590328140 Flavonoid C4H medium borderline
BOampscaffold62550389580 Flavonoid C4H medium borderline
BOampscaffold630390940 Flavonoid C4H medium borderline
BOampscaffold630390950 Flavonoid C4H medium pass
BOampscaffold7800415900 Flavonoid C4H low borderline
BOampC107200990001540 Rosmarinic Acid C4H medium pass
BOampC107643770002190 Rosmarinic Acid C4H low borderline
BOampC109207330007260 Rosmarinic Acid C4H medium pass
BOampC109336570007900 Rosmarinic Acid C4H low borderline
BOampscaffold100014230 Rosmarinic Acid C4H low borderline
BOampscaffold100014240 Rosmarinic Acid C4H low borderline
BOampscaffold100014250 Rosmarinic Acid C4H low borderline
BOampscaffold100014270 Rosmarinic Acid C4H low borderline
BOampscaffold100019010 Rosmarinic Acid C4H low borderline
BOampscaffold100019640 Rosmarinic Acid C4H low borderline
BOampscaffold10013080 Rosmarinic Acid C4H low borderline
BOampscaffold10060022070 Rosmarinic Acid C4H low borderline
BOampscaffold10060023570 Rosmarinic Acid C4H medium pass
BOampscaffold1020025300 Rosmarinic Acid C4H medium pass
BOampscaffold1020025310 Rosmarinic Acid C4H medium pass
BOampscaffold1020025320 Rosmarinic Acid C4H medium pass
BOampscaffold1020026300 Rosmarinic Acid C4H low borderline
BOampscaffold1020026600 Rosmarinic Acid C4H low borderline
BOampscaffold10350029400 Rosmarinic Acid C4H medium pass
BOampscaffold1060034380 Rosmarinic Acid C4H low borderline
BOampscaffold1070034870 Rosmarinic Acid C4H medium pass
BOampscaffold10810036490 Rosmarinic Acid C4H low borderline
BOampscaffold10810036500 Rosmarinic Acid C4H medium pass
BOampscaffold11000042370 Rosmarinic Acid C4H low borderline
BOampscaffold11020042510 Rosmarinic Acid C4H low borderline
BOampscaffold1130045340 Rosmarinic Acid C4H low borderline
BOampscaffold1130047990 Rosmarinic Acid C4H low borderline
BOampscaffold1130048110 Rosmarinic Acid C4H low borderline
BOampscaffold115070049960 Rosmarinic Acid C4H low borderline
BOampscaffold12030053060 Rosmarinic Acid C4H low borderline
BOampscaffold1210053960 Rosmarinic Acid C4H low borderline
BOampscaffold12270060580 Rosmarinic Acid C4H medium pass
BOampscaffold12510061960 Rosmarinic Acid C4H medium pass
BOampscaffold12790065050 Rosmarinic Acid C4H low borderline
BOampscaffold12790065060 Rosmarinic Acid C4H low borderline
BOampscaffold12790065080 Rosmarinic Acid C4H low borderline
BOampscaffold12960068240 Rosmarinic Acid C4H low borderline
BOampscaffold130068710 Rosmarinic Acid C4H low borderline