PlantSME Plant secondary metabolism enzyme database

Bonia amplexicaulis (bonia_amplexicaulis)

Imported from atlas release summary for Bonia amplexicaulis.

2193
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 621 20 BAHD (247) View species results
Phenylpropanoid pathway 530 12 POD (270) View species results
Alkaloid pathway 443 24 7DLGT (85) View species results
Flavonoid pathway 283 12 UFGT (173) View species results
Rosmarinic acid pathway 196 7 C4H (82) View species results
Steroid pathway 120 13 SMT1/SMT2/SMT3 (51) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1655 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 469 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
BOampscaffold23270190520 Flavonoid F3H medium pass
BOampscaffold23350191040 Flavonoid F3H medium borderline
BOampscaffold2500204140 Flavonoid F3H medium borderline
BOampscaffold2550206220 Flavonoid F3H medium borderline
BOampscaffold2550207340 Flavonoid F3H low borderline
BOampscaffold280219040 Flavonoid F3H medium borderline
BOampscaffold280219240 Flavonoid F3H medium borderline
BOampscaffold280221900 Flavonoid F3H medium borderline
BOampscaffold280221910 Flavonoid F3H medium borderline
BOampscaffold280223790 Flavonoid F3H medium borderline
BOampscaffold280225190 Flavonoid F3H medium pass
BOampscaffold2950234940 Flavonoid F3H medium pass
BOampscaffold30230242410 Flavonoid F3H low borderline
BOampscaffold30236410 Flavonoid F3H medium borderline
BOampscaffold30240100 Flavonoid F3H low borderline
BOampscaffold3040243660 Flavonoid F3H medium pass
BOampscaffold310248550 Flavonoid F3H medium borderline
BOampscaffold310253520 Flavonoid F3H medium borderline
BOampscaffold31080255220 Flavonoid F3H medium borderline
BOampscaffold31080255230 Flavonoid F3H medium borderline
BOampscaffold32190257890 Flavonoid F3H medium borderline
BOampscaffold3230261960 Flavonoid F3H medium borderline
BOampscaffold350276270 Flavonoid F3H medium borderline
BOampscaffold3670283440 Flavonoid F3H medium borderline
BOampscaffold3680283700 Flavonoid F3H medium borderline
BOampscaffold37960293380 Flavonoid F3H medium borderline
BOampscaffold3880295800 Flavonoid F3H medium borderline
BOampscaffold3890296650 Flavonoid F3H medium borderline
BOampscaffold390298220 Flavonoid F3H medium borderline
BOampscaffold3980302650 Flavonoid F3H medium borderline
BOampscaffold3980304400 Flavonoid F3H medium borderline
BOampscaffold3980306540 Flavonoid F3H low borderline
BOampscaffold42400311160 Flavonoid F3H medium borderline
BOampscaffold4340317720 Flavonoid F3H low borderline
BOampscaffold4340317730 Flavonoid F3H medium pass
BOampscaffold460333110 Flavonoid F3H low borderline
BOampscaffold460336160 Flavonoid F3H medium borderline
BOampscaffold460340240 Flavonoid F3H medium borderline
BOampscaffold4690343060 Flavonoid F3H medium pass
BOampscaffold470344420 Flavonoid F3H medium borderline
BOampscaffold470346170 Flavonoid F3H medium borderline
BOampscaffold470346180 Flavonoid F3H medium pass
BOampscaffold480350080 Flavonoid F3H medium borderline
BOampscaffold490353200 Flavonoid F3H medium borderline
BOampscaffold4940353950 Flavonoid F3H low borderline
BOampscaffold4940354380 Flavonoid F3H medium borderline
BOampscaffold5000363810 Flavonoid F3H medium borderline
BOampscaffold5000363820 Flavonoid F3H medium borderline
BOampscaffold5000364200 Flavonoid F3H low borderline
BOampscaffold5000365500 Flavonoid F3H medium borderline