PlantSME Plant secondary metabolism enzyme database

Bonia amplexicaulis (bonia_amplexicaulis)

Imported from atlas release summary for Bonia amplexicaulis.

2193
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 621 20 BAHD (247) View species results
Phenylpropanoid pathway 530 12 POD (270) View species results
Alkaloid pathway 443 24 7DLGT (85) View species results
Flavonoid pathway 283 12 UFGT (173) View species results
Rosmarinic acid pathway 196 7 C4H (82) View species results
Steroid pathway 120 13 SMT1/SMT2/SMT3 (51) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1655 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 469 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: RAS
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Gene Pathway Family Confidence Status
BOampscaffold7070399370 Rosmarinic Acid RAS medium pass
BOampscaffold710400640 Rosmarinic Acid RAS low borderline
BOampscaffold7430405260 Rosmarinic Acid RAS medium pass
BOampscaffold750407710 Rosmarinic Acid RAS medium pass
BOampscaffold750407730 Rosmarinic Acid RAS medium pass
BOampscaffold750407740 Rosmarinic Acid RAS medium pass
BOampscaffold750407750 Rosmarinic Acid RAS medium pass
BOampscaffold780413370 Rosmarinic Acid RAS medium pass
BOampscaffold78380416700 Rosmarinic Acid RAS low borderline
BOampscaffold7930417770 Rosmarinic Acid RAS low borderline
BOampscaffold8100424100 Rosmarinic Acid RAS low borderline
BOampscaffold810423120 Rosmarinic Acid RAS low borderline
BOampscaffold8320427230 Rosmarinic Acid RAS low borderline
BOampscaffold8470429890 Rosmarinic Acid RAS low borderline
BOampscaffold900442360 Rosmarinic Acid RAS low borderline
BOampscaffold9080448900 Rosmarinic Acid RAS medium pass
BOampscaffold930459460 Rosmarinic Acid RAS medium pass
BOampscaffold930459470 Rosmarinic Acid RAS low borderline