PlantSME Plant secondary metabolism enzyme database

Bonia amplexicaulis (bonia_amplexicaulis)

Imported from atlas release summary for Bonia amplexicaulis.

2193
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 621 20 BAHD (247) View species results
Phenylpropanoid pathway 530 12 POD (270) View species results
Alkaloid pathway 443 24 7DLGT (85) View species results
Flavonoid pathway 283 12 UFGT (173) View species results
Rosmarinic acid pathway 196 7 C4H (82) View species results
Steroid pathway 120 13 SMT1/SMT2/SMT3 (51) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1655 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 469 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
BOampscaffold1980154380 Alkaloid T3O medium borderline
BOampscaffold20520161690 Alkaloid T3O low borderline
BOampscaffold20520162570 Alkaloid T3O medium borderline
BOampscaffold20520162610 Alkaloid T3O medium borderline
BOampscaffold20890163840 Alkaloid T3O medium pass
BOampscaffold2090168010 Alkaloid T3O medium pass
BOampscaffold210171680 Alkaloid T3O medium pass
BOampscaffold21770176690 Alkaloid T3O low borderline
BOampscaffold2230179630 Alkaloid T3O low borderline
BOampscaffold22450183340 Alkaloid T3O low borderline
BOampscaffold2290188670 Alkaloid T3O low borderline
BOampscaffold23270190570 Alkaloid T3O medium pass
BOampscaffold2340192160 Alkaloid T3O medium borderline
BOampscaffold24070195940 Alkaloid T3O medium borderline
BOampscaffold24200197440 Alkaloid T3O medium pass
BOampscaffold24850203200 Alkaloid T3O low borderline
BOampscaffold260209040 Alkaloid T3O medium borderline
BOampscaffold260209660 Alkaloid T3O medium borderline
BOampscaffold27110215120 Alkaloid T3O low borderline
BOampscaffold280218910 Alkaloid T3O low borderline
BOampscaffold280222270 Alkaloid T3O medium pass
BOampscaffold2860228220 Alkaloid T3O medium borderline
BOampscaffold2870228650 Alkaloid T3O medium borderline
BOampscaffold290231570 Alkaloid T3O medium borderline
BOampscaffold300241950 Alkaloid T3O medium borderline
BOampscaffold30235820 Alkaloid T3O medium pass
BOampscaffold30236470 Alkaloid T3O low borderline
BOampscaffold30237110 Alkaloid T3O medium borderline
BOampscaffold30237120 Alkaloid T3O medium borderline
BOampscaffold30241270 Alkaloid T3O medium borderline
BOampscaffold3080246250 Alkaloid T3O medium borderline
BOampscaffold310247290 Alkaloid T3O low borderline
BOampscaffold310250700 Alkaloid T3O medium pass
BOampscaffold3160256120 Alkaloid T3O medium borderline
BOampscaffold3210257210 Alkaloid T3O medium borderline
BOampscaffold3230261920 Alkaloid T3O medium borderline
BOampscaffold3230263670 Alkaloid T3O medium pass
BOampscaffold3270265230 Alkaloid T3O medium borderline
BOampscaffold33850268780 Alkaloid T3O medium borderline
BOampscaffold350273980 Alkaloid T3O medium borderline
BOampscaffold350276000 Alkaloid T3O medium borderline
BOampscaffold350276330 Alkaloid T3O medium borderline
BOampscaffold350276580 Alkaloid T3O medium borderline
BOampscaffold360280660 Alkaloid T3O medium borderline
BOampscaffold3740290540 Alkaloid T3O low borderline
BOampscaffold3890297420 Alkaloid T3O low borderline
BOampscaffold3980301380 Alkaloid T3O medium pass
BOampscaffold3980303680 Alkaloid T3O medium pass
BOampscaffold4340316700 Alkaloid T3O medium borderline
BOampscaffold4340316710 Alkaloid T3O medium borderline