PlantSME Plant secondary metabolism enzyme database

Bonia amplexicaulis (bonia_amplexicaulis)

Imported from atlas release summary for Bonia amplexicaulis.

2193
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 621 20 BAHD (247) View species results
Phenylpropanoid pathway 530 12 POD (270) View species results
Alkaloid pathway 443 24 7DLGT (85) View species results
Flavonoid pathway 283 12 UFGT (173) View species results
Rosmarinic acid pathway 196 7 C4H (82) View species results
Steroid pathway 120 13 SMT1/SMT2/SMT3 (51) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1655 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 469 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TRI/TRII
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Gene Pathway Family Confidence Status Best Target
BOampscaffold10060020690 Alkaloid TRI/TRII medium pass TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
BOampscaffold10060021560 Alkaloid TRI/TRII medium pass TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
BOampscaffold10060021570 Alkaloid TRI/TRII medium pass TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
BOampscaffold10060021580 Alkaloid TRI/TRII low borderline TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
BOampscaffold12600064010 Alkaloid TRI/TRII medium pass TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
BOampscaffold1290067190 Alkaloid TRI/TRII low borderline TRI_TRII__00005__sp_P50162_TRN1_DATST
BOampscaffold13660074400 Alkaloid TRI/TRII medium pass TRI_TRII__00001__sp_A7DY56_TRN1_COCOF
BOampscaffold13660074410 Alkaloid TRI/TRII medium pass TRI_TRII__00001__sp_A7DY56_TRN1_COCOF
BOampscaffold1500092580 Alkaloid TRI/TRII medium pass TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH
BOampscaffold1660116340 Alkaloid TRI/TRII medium pass TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB
BOampscaffold1660116350 Alkaloid TRI/TRII medium pass TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB
BOampscaffold16620119390 Alkaloid TRI/TRII medium pass TRI_TRII__00005__sp_P50162_TRN1_DATST
BOampscaffold16740120060 Alkaloid TRI/TRII medium pass TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
BOampscaffold16740120070 Alkaloid TRI/TRII medium pass TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
BOampscaffold16770120510 Alkaloid TRI/TRII medium pass TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
BOampscaffold16770120520 Alkaloid TRI/TRII medium pass TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
BOampscaffold17140124260 Alkaloid TRI/TRII low borderline TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
BOampscaffold17140124470 Alkaloid TRI/TRII medium pass TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
BOampscaffold18400140260 Alkaloid TRI/TRII medium pass TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
BOampscaffold1910143300 Alkaloid TRI/TRII medium pass TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB
BOampscaffold1980149690 Alkaloid TRI/TRII medium pass TRI_TRII__00009__sp_Q9ZW19_TRNHC_ARATH
BOampscaffold1980150940 Alkaloid TRI/TRII medium pass TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
BOampscaffold20290157030 Alkaloid TRI/TRII medium pass TRI_TRII__00008__sp_Q9ZW18_SAG13_ARATH
BOampscaffold2040158990 Alkaloid TRI/TRII medium pass TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
BOampscaffold2090165760 Alkaloid TRI/TRII medium pass TRI_TRII__00008__sp_Q9ZW18_SAG13_ARATH
BOampscaffold2090166990 Alkaloid TRI/TRII medium pass TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
BOampscaffold2260184400 Alkaloid TRI/TRII medium pass TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB
BOampscaffold23930195400 Alkaloid TRI/TRII low borderline TRI_TRII__00005__sp_P50162_TRN1_DATST
BOampscaffold2690213820 Alkaloid TRI/TRII medium pass TRI_TRII__00001__sp_A7DY56_TRN1_COCOF
BOampscaffold2870229140 Alkaloid TRI/TRII medium pass TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
BOampscaffold28900230700 Alkaloid TRI/TRII medium pass TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
BOampscaffold3040244550 Alkaloid TRI/TRII medium pass TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
BOampscaffold32800265920 Alkaloid TRI/TRII medium pass TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
BOampscaffold32800265930 Alkaloid TRI/TRII medium pass TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
BOampscaffold32800265940 Alkaloid TRI/TRII medium pass TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
BOampscaffold34270269580 Alkaloid TRI/TRII low borderline TRI_TRII__00005__sp_P50162_TRN1_DATST
BOampscaffold350276060 Alkaloid TRI/TRII low borderline TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH
BOampscaffold36180282180 Alkaloid TRI/TRII low borderline TRI_TRII__00009__sp_Q9ZW19_TRNHC_ARATH
BOampscaffold3890297100 Alkaloid TRI/TRII medium pass TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
BOampscaffold4230310660 Alkaloid TRI/TRII medium pass TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
BOampscaffold4230310670 Alkaloid TRI/TRII medium pass TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
BOampscaffold50361010 Alkaloid TRI/TRII low borderline TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH
BOampscaffold530371390 Alkaloid TRI/TRII medium pass TRI_TRII__00005__sp_P50162_TRN1_DATST
BOampscaffold7430404240 Alkaloid TRI/TRII medium borderline TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH
BOampscaffold7760409850 Alkaloid TRI/TRII medium pass TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
BOampscaffold7760411850 Alkaloid TRI/TRII low borderline TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
BOampscaffold7760411860 Alkaloid TRI/TRII medium pass TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB
BOampscaffold7760411870 Alkaloid TRI/TRII medium pass TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
BOampscaffold8170425890 Alkaloid TRI/TRII medium pass TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB
BOampscaffold8470429600 Alkaloid TRI/TRII low borderline TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB