PlantSME Plant secondary metabolism enzyme database

Bonia amplexicaulis (bonia_amplexicaulis)

Imported from atlas release summary for Bonia amplexicaulis.

2552
Candidate Protein Records
2193
Pathway-Level Records
4958
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 621 20 BAHD (247) View species results
Phenylpropanoid pathway 530 12 POD (270) View species results
Alkaloid pathway 443 24 7DLGT (85) View species results
Flavonoid pathway 283 12 UFGT (173) View species results
Rosmarinic acid pathway 196 7 C4H (82) View species results
Steroid pathway 120 13 SMT1/SMT2/SMT3 (51) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1655 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 469 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
BOampscaffold4230310670 Alkaloid TRI/TRII medium pass
BOampscaffold50361010 Alkaloid TRI/TRII low borderline
BOampscaffold530371390 Alkaloid TRI/TRII medium pass
BOampscaffold7430404240 Alkaloid TRI/TRII medium borderline
BOampscaffold7760409850 Alkaloid TRI/TRII medium pass
BOampscaffold7760411850 Alkaloid TRI/TRII low borderline
BOampscaffold7760411860 Alkaloid TRI/TRII medium pass
BOampscaffold7760411870 Alkaloid TRI/TRII medium pass
BOampscaffold8170425890 Alkaloid TRI/TRII medium pass
BOampscaffold8470429600 Alkaloid TRI/TRII low borderline
BOampscaffold8710435140 Alkaloid TRI/TRII medium pass
BOampC109307570007770 Alkaloid TYDC_DDC low borderline
BOampscaffold1020026450 Alkaloid TYDC_DDC medium borderline
BOampscaffold1020026460 Alkaloid TYDC_DDC medium borderline
BOampscaffold2340192210 Alkaloid TYDC_DDC medium borderline
BOampscaffold290231810 Alkaloid TYDC_DDC medium borderline
BOampscaffold32770265660 Alkaloid TYDC_DDC medium borderline
BOampscaffold32770265670 Alkaloid TYDC_DDC medium borderline
BOampscaffold350271840 Alkaloid TYDC_DDC medium borderline
BOampscaffold460334240 Alkaloid TYDC_DDC medium borderline
BOampscaffold7070399470 Alkaloid TYDC_DDC medium borderline
BOampscaffold810422970 Alkaloid TYDC_DDC medium borderline
BOampscaffold9120450140 Alkaloid TYDC_DDC medium borderline
BOampscaffold9120450150 Alkaloid TYDC_DDC medium borderline
BOampscaffold9120450160 Alkaloid TYDC_DDC medium borderline
BOampscaffold100015710 Alkaloid XMT_MXMT_DXMT low borderline