PlantSME Plant secondary metabolism enzyme database

Bonia amplexicaulis (bonia_amplexicaulis)

Imported from atlas release summary for Bonia amplexicaulis.

2193
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 621 20 BAHD (247) View species results
Phenylpropanoid pathway 530 12 POD (270) View species results
Alkaloid pathway 443 24 7DLGT (85) View species results
Flavonoid pathway 283 12 UFGT (173) View species results
Rosmarinic acid pathway 196 7 C4H (82) View species results
Steroid pathway 120 13 SMT1/SMT2/SMT3 (51) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1655 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 469 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
BOampscaffold2680213600 Alkaloid 7DLGT medium pass
BOampscaffold2770217370 Alkaloid 7DLGT medium pass
BOampscaffold2770217380 Alkaloid 7DLGT low borderline
BOampscaffold2770217390 Alkaloid 7DLGT high pass
BOampscaffold2790218720 Alkaloid 7DLGT low borderline
BOampscaffold280219660 Alkaloid 7DLGT low borderline
BOampscaffold280222700 Alkaloid 7DLGT medium pass
BOampscaffold280222710 Alkaloid 7DLGT low borderline
BOampscaffold280223720 Alkaloid 7DLGT low borderline
BOampscaffold2890230360 Alkaloid 7DLGT low borderline
BOampscaffold29500235120 Alkaloid 7DLGT medium pass
BOampscaffold2950233940 Alkaloid 7DLGT medium pass
BOampscaffold300241910 Alkaloid 7DLGT medium pass
BOampscaffold3040242720 Alkaloid 7DLGT medium pass
BOampscaffold3040245610 Alkaloid 7DLGT medium pass
BOampscaffold310247100 Alkaloid 7DLGT medium pass
BOampscaffold310252980 Alkaloid 7DLGT medium pass
BOampscaffold310252990 Alkaloid 7DLGT high pass
BOampscaffold31340255610 Alkaloid 7DLGT low borderline
BOampscaffold31340255620 Alkaloid 7DLGT low borderline
BOampscaffold3230259820 Alkaloid 7DLGT low borderline
BOampscaffold3230260140 Alkaloid 7DLGT low borderline
BOampscaffold3300266420 Alkaloid 7DLGT low borderline
BOampscaffold3420269510 Alkaloid 7DLGT medium pass
BOampscaffold3420269520 Alkaloid 7DLGT low borderline
BOampscaffold350274320 Alkaloid 7DLGT medium pass
BOampscaffold350274340 Alkaloid 7DLGT medium pass
BOampscaffold3680283750 Alkaloid 7DLGT low borderline
BOampscaffold3680283760 Alkaloid 7DLGT low borderline
BOampscaffold3710286550 Alkaloid 7DLGT medium pass
BOampscaffold3710286560 Alkaloid 7DLGT medium pass
BOampscaffold3710286570 Alkaloid 7DLGT medium pass
BOampscaffold3710286600 Alkaloid 7DLGT medium pass
BOampscaffold3740288580 Alkaloid 7DLGT low borderline
BOampscaffold3740288590 Alkaloid 7DLGT low borderline
BOampscaffold3740290000 Alkaloid 7DLGT low borderline
BOampscaffold3740290560 Alkaloid 7DLGT low borderline
BOampscaffold3740291560 Alkaloid 7DLGT low borderline
BOampscaffold3770292780 Alkaloid 7DLGT medium pass
BOampscaffold3860295240 Alkaloid 7DLGT low borderline
BOampscaffold3860295290 Alkaloid 7DLGT low borderline
BOampscaffold3940299110 Alkaloid 7DLGT low borderline
BOampscaffold3980301170 Alkaloid 7DLGT low borderline
BOampscaffold3980303670 Alkaloid 7DLGT medium pass
BOampscaffold4080308310 Alkaloid 7DLGT low borderline
BOampscaffold42350310960 Alkaloid 7DLGT low borderline
BOampscaffold4260311320 Alkaloid 7DLGT medium pass
BOampscaffold4280311660 Alkaloid 7DLGT medium pass
BOampscaffold4290315290 Alkaloid 7DLGT medium pass
BOampscaffold4310316030 Alkaloid 7DLGT low borderline