PlantSME Plant secondary metabolism enzyme database

Bonia amplexicaulis (bonia_amplexicaulis)

Imported from atlas release summary for Bonia amplexicaulis.

2193
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 621 20 BAHD (247) View species results
Phenylpropanoid pathway 530 12 POD (270) View species results
Alkaloid pathway 443 24 7DLGT (85) View species results
Flavonoid pathway 283 12 UFGT (173) View species results
Rosmarinic acid pathway 196 7 C4H (82) View species results
Steroid pathway 120 13 SMT1/SMT2/SMT3 (51) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1655 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 469 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
BOampscaffold20520162620 Rosmarinic Acid C4H low borderline
BOampscaffold2090168010 Rosmarinic Acid C4H low borderline
BOampscaffold2090169110 Rosmarinic Acid C4H low borderline
BOampscaffold2100172820 Rosmarinic Acid C4H medium pass
BOampscaffold21950177570 Rosmarinic Acid C4H low borderline
BOampscaffold22140178320 Rosmarinic Acid C4H low borderline
BOampscaffold22140178330 Rosmarinic Acid C4H low borderline
BOampscaffold2230179630 Rosmarinic Acid C4H low borderline
BOampscaffold2230180120 Rosmarinic Acid C4H low borderline
BOampscaffold23040189740 Rosmarinic Acid C4H low borderline
BOampscaffold23370191190 Rosmarinic Acid C4H low borderline
BOampscaffold2340192160 Rosmarinic Acid C4H medium pass
BOampscaffold23910195300 Rosmarinic Acid C4H low borderline
BOampscaffold24070195940 Rosmarinic Acid C4H medium pass
BOampscaffold24200197440 Rosmarinic Acid C4H low borderline
BOampscaffold2440198470 Rosmarinic Acid C4H low borderline
BOampscaffold2440198490 Rosmarinic Acid C4H low borderline
BOampscaffold2440198510 Rosmarinic Acid C4H low borderline
BOampscaffold24820203010 Rosmarinic Acid C4H low borderline
BOampscaffold260209040 Rosmarinic Acid C4H medium pass
BOampscaffold260209660 Rosmarinic Acid C4H medium pass
BOampscaffold2620210680 Rosmarinic Acid C4H low borderline
BOampscaffold27630216560 Rosmarinic Acid C4H low borderline
BOampscaffold27630216580 Rosmarinic Acid C4H low borderline
BOampscaffold27730217900 Rosmarinic Acid C4H low borderline
BOampscaffold2790218090 Rosmarinic Acid C4H low borderline
BOampscaffold2790218570 Rosmarinic Acid C4H low borderline
BOampscaffold280218910 Rosmarinic Acid C4H low borderline
BOampscaffold280222140 Rosmarinic Acid C4H low borderline
BOampscaffold280225370 Rosmarinic Acid C4H low borderline
BOampscaffold2860228220 Rosmarinic Acid C4H medium pass
BOampscaffold2860228230 Rosmarinic Acid C4H low borderline
BOampscaffold2860228250 Rosmarinic Acid C4H low borderline
BOampscaffold2870228500 Rosmarinic Acid C4H medium pass
BOampscaffold2870228650 Rosmarinic Acid C4H medium pass
BOampscaffold2870229590 Rosmarinic Acid C4H low borderline
BOampscaffold2870229600 Rosmarinic Acid C4H medium pass
BOampscaffold290231570 Rosmarinic Acid C4H low borderline
BOampscaffold29470233630 Rosmarinic Acid C4H low borderline
BOampscaffold2950233720 Rosmarinic Acid C4H low borderline
BOampscaffold300241950 Rosmarinic Acid C4H low borderline
BOampscaffold30235820 Rosmarinic Acid C4H low borderline
BOampscaffold30236470 Rosmarinic Acid C4H low borderline
BOampscaffold30237110 Rosmarinic Acid C4H medium pass
BOampscaffold30237120 Rosmarinic Acid C4H medium pass
BOampscaffold30241270 Rosmarinic Acid C4H low borderline
BOampscaffold3080246250 Rosmarinic Acid C4H low borderline
BOampscaffold310247290 Rosmarinic Acid C4H low borderline
BOampscaffold310250700 Rosmarinic Acid C4H low borderline
BOampscaffold3160256120 Rosmarinic Acid C4H medium pass