PlantSME Plant secondary metabolism enzyme database

Bonia amplexicaulis (bonia_amplexicaulis)

Imported from atlas release summary for Bonia amplexicaulis.

2193
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 621 20 BAHD (247) View species results
Phenylpropanoid pathway 530 12 POD (270) View species results
Alkaloid pathway 443 24 7DLGT (85) View species results
Flavonoid pathway 283 12 UFGT (173) View species results
Rosmarinic acid pathway 196 7 C4H (82) View species results
Steroid pathway 120 13 SMT1/SMT2/SMT3 (51) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1655 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 469 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
BOampscaffold27630216580 Steroid CYP90D1 low borderline
BOampscaffold280222270 Steroid CYP90D1 medium borderline
BOampscaffold280225370 Steroid CYP90D1 medium borderline
BOampscaffold2860228250 Steroid CYP90D1 low borderline
BOampscaffold30235810 Steroid CYP90D1 low borderline
BOampscaffold30235820 Steroid CYP90D1 medium borderline
BOampscaffold4940354470 Steroid CYP90D1 low borderline
BOampscaffold50070365730 Steroid CYP90D1 low borderline
BOampscaffold630390530 Steroid CYP90D1 low borderline
BOampscaffold630390940 Steroid CYP90D1 low borderline
BOampscaffold7760412390 Steroid CYP90D1 low borderline
BOampscaffold9310460340 Steroid CYP90D1 low borderline
BOampscaffold2280187450 Steroid DET2 low borderline
BOampscaffold460336920 Steroid DET2 medium pass
BOampscaffold460339440 Steroid DET2 medium pass
BOampscaffold4940355130 Steroid DET2 low borderline
BOampscaffold16770120480 Steroid DWF1 low borderline
BOampscaffold17510130770 Steroid DWF1 medium pass
BOampscaffold20520161610 Steroid DWF1 low borderline
BOampscaffold32800265780 Steroid DWF1 low borderline
BOampscaffold7650408790 Steroid DWF1 medium pass
BOampscaffold8170425830 Steroid DWF1 medium pass
BOampC109336570007900 Steroid DWF4/CYP90B1 low borderline
BOampC109615610009020 Steroid DWF4/CYP90B1 low borderline
BOampC110451690011710 Steroid DWF4/CYP90B1 low borderline
BOampC110605270012130 Steroid DWF4/CYP90B1 low borderline
BOampC110605270012140 Steroid DWF4/CYP90B1 low borderline
BOampscaffold100014230 Steroid DWF4/CYP90B1 medium borderline
BOampscaffold100014240 Steroid DWF4/CYP90B1 low borderline
BOampscaffold100014270 Steroid DWF4/CYP90B1 medium borderline
BOampscaffold10013080 Steroid DWF4/CYP90B1 low borderline
BOampscaffold10060021990 Steroid DWF4/CYP90B1 low borderline
BOampscaffold10060022420 Steroid DWF4/CYP90B1 low borderline
BOampscaffold1020026600 Steroid DWF4/CYP90B1 low borderline
BOampscaffold10350029400 Steroid DWF4/CYP90B1 low borderline
BOampscaffold10810036500 Steroid DWF4/CYP90B1 low borderline
BOampscaffold1130047990 Steroid DWF4/CYP90B1 low borderline
BOampscaffold1130048110 Steroid DWF4/CYP90B1 low borderline
BOampscaffold12030053060 Steroid DWF4/CYP90B1 low borderline
BOampscaffold12150057280 Steroid DWF4/CYP90B1 low borderline
BOampscaffold12510061960 Steroid DWF4/CYP90B1 low borderline
BOampscaffold12790065050 Steroid DWF4/CYP90B1 low borderline
BOampscaffold12790065060 Steroid DWF4/CYP90B1 low borderline
BOampscaffold12790065080 Steroid DWF4/CYP90B1 low borderline
BOampscaffold130068710 Steroid DWF4/CYP90B1 low borderline
BOampscaffold13060070270 Steroid DWF4/CYP90B1 medium borderline
BOampscaffold13100070450 Steroid DWF4/CYP90B1 low borderline
BOampscaffold13820075270 Steroid DWF4/CYP90B1 low borderline
BOampscaffold140079320 Steroid DWF4/CYP90B1 medium borderline
BOampscaffold14420084190 Steroid DWF4/CYP90B1 low borderline