PlantSME Plant secondary metabolism enzyme database

Brassica juncea (brassica_juncea)

Imported from atlas release summary for Brassica juncea.

4298
Candidate Protein Records
3334
Pathway-Level Records
8339
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1088 19 BAHD (493) View species results
Alkaloid pathway 695 23 NMT (133) View species results
Phenylpropanoid pathway 689 11 POD (300) View species results
Flavonoid pathway 411 14 UFGT (250) View species results
Rosmarinic acid pathway 257 7 C4H (88) View species results
Steroid pathway 194 12 SMT1/SMT2/SMT3 (76) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3016 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 723 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status Best Target
BjunContig429_2167249_2323184_2780_800000032840 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
BjunContig5330039850 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
BjunContig71_869334_18815850046100 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
BjunContig71_869334_18815850046750 Phenylpropanoid POD medium pass POD__00028__sp_Q9ZVD5_AGO4_ARATH
BjunContig71_869334_18815850046860 Phenylpropanoid POD medium pass POD__00028__sp_Q9ZVD5_AGO4_ARATH
BjunContig82090049170 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
BjunSuper_scaffold_109_3169392_4351964_52914_5676090055090 Phenylpropanoid POD medium pass POD__00027__sp_Q9XIV8_PERN1_TOBAC
BjunSuper_scaffold_144_865122_12352030058140 Phenylpropanoid POD low borderline POD__00021__sp_Q9LEH3_PER15_IPOBA
BjunSuper_scaffold_1500058840 Phenylpropanoid POD medium pass POD__00027__sp_Q9XIV8_PERN1_TOBAC
BjunSuper_scaffold_178_1239001_2092318_1_922940059860 Phenylpropanoid POD medium pass POD__00028__sp_Q9ZVD5_AGO4_ARATH
BjunSuper_scaffold_184_753382_15810110060640 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
BjunSuper_scaffold_184_753382_15810110061680 Phenylpropanoid POD medium pass POD__00006__sp_O22850_GPX3_ARATH
BjunSuper_scaffold_184_753382_15810110061690 Phenylpropanoid POD medium pass POD__00006__sp_O22850_GPX3_ARATH
BjunSuper_scaffold_184_753382_15810110061910 Phenylpropanoid POD low borderline POD__00011__sp_Q05431_APX1_ARATH
BjunSuper_scaffold_48_1_28833410066730 Phenylpropanoid POD medium pass POD__00015__sp_Q69SV0_APX8_ORYSJ
BjunSuper_scaffold_57_401097_21588950067480 Phenylpropanoid POD medium pass POD__00019__sp_Q949Y3_PPA26_ARATH
BjunSuper_scaffold_5_1_6334723_745148_63347230068540 Phenylpropanoid POD medium pass POD__00028__sp_Q9ZVD5_AGO4_ARATH
BjunSuper_scaffold_79_1679884_21839240073220 Phenylpropanoid POD low borderline POD__00001__sp_A5H452_PER70_MAIZE
BjunSuper_scaffold_93_1_1892870074800 Phenylpropanoid POD medium pass POD__00022__sp_Q9LU86_PRXQ_ARATH
BjunA01G0008730 Rosmarinic Acid 4CL medium pass 4CL__00014__sp_Q84P24_4CLL6_ARATH
BjunA01G0012180 Rosmarinic Acid 4CL low borderline 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
BjunA01G0029040 Rosmarinic Acid 4CL low borderline 4CL__00018__sp_Q9S777_4CL3_ARATH
BjunA02G0005750 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
BjunA02G0008580 Rosmarinic Acid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
BjunA02G0014590 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
BjunA02G0019440 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
BjunA02G0020210 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
BjunA02G0024110 Rosmarinic Acid 4CL low borderline 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
BjunA02G0037050 Rosmarinic Acid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
BjunA03G0027750 Rosmarinic Acid 4CL low borderline 4CL__00018__sp_Q9S777_4CL3_ARATH
BjunA03G0033690 Rosmarinic Acid 4CL medium pass 4CL__00015__sp_Q9LU36_4CL4_ARATH
BjunA03G0033710 Rosmarinic Acid 4CL medium pass 4CL__00015__sp_Q9LU36_4CL4_ARATH
BjunA03G0034810 Rosmarinic Acid 4CL low borderline 4CL__00012__sp_Q84P21_4CLL5_ARATH
BjunA03G0035570 Rosmarinic Acid 4CL low borderline 4CL__00005__sp_P0C5B6_4CLL4_ARATH
BjunA03G0035670 Rosmarinic Acid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
BjunA03G0036030 Rosmarinic Acid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
BjunA04G0011420 Rosmarinic Acid 4CL low borderline 4CL__00005__sp_P0C5B6_4CLL4_ARATH
BjunA05G0000540 Rosmarinic Acid 4CL low borderline 4CL__00015__sp_Q9LU36_4CL4_ARATH
BjunA05G0016870 Rosmarinic Acid 4CL low borderline 4CL__00006__sp_P17814_4CL1_ORYSJ
BjunA05G0021250 Rosmarinic Acid 4CL medium pass 4CL__00015__sp_Q9LU36_4CL4_ARATH
BjunA05G0021310 Rosmarinic Acid 4CL medium pass 4CL__00015__sp_Q9LU36_4CL4_ARATH
BjunA05G0024530 Rosmarinic Acid 4CL low borderline 4CL__00018__sp_Q9S777_4CL3_ARATH
BjunA05G0030800 Rosmarinic Acid 4CL low borderline 4CL__00018__sp_Q9S777_4CL3_ARATH
BjunA06G0012610 Rosmarinic Acid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
BjunA06G0012620 Rosmarinic Acid 4CL medium pass 4CL__00005__sp_P0C5B6_4CLL4_ARATH
BjunA06G0012640 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
BjunA06G0013570 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
BjunA06G0014410 Rosmarinic Acid 4CL medium pass 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
BjunA06G0026050 Rosmarinic Acid 4CL low borderline 4CL__00010__sp_Q6ETN3_4CL3_ORYSJ
BjunA07G0002350 Rosmarinic Acid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY