PlantSME Plant secondary metabolism enzyme database

Brassica juncea (brassica_juncea)

Imported from atlas release summary for Brassica juncea.

4298
Candidate Protein Records
3334
Pathway-Level Records
8339
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1088 19 BAHD (493) View species results
Alkaloid pathway 695 23 NMT (133) View species results
Phenylpropanoid pathway 689 11 POD (300) View species results
Flavonoid pathway 411 14 UFGT (250) View species results
Rosmarinic acid pathway 257 7 C4H (88) View species results
Steroid pathway 194 12 SMT1/SMT2/SMT3 (76) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3016 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 723 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
BjunSuper_scaffold_28_1_2326914_1_4646450064120 Alkaloid CODM/T6ODM medium borderline
BjunSuper_scaffold_5_1_6334723_245229_7451470068370 Alkaloid CODM/T6ODM medium borderline
BjunA02G0036780 Alkaloid COR medium pass
BjunA03G0000160 Alkaloid COR medium pass
BjunA03G0017180 Alkaloid COR medium pass
BjunA03G0017190 Alkaloid COR medium pass
BjunA05G0006350 Alkaloid COR low borderline
BjunA05G0006360 Alkaloid COR medium pass
BjunA05G0006370 Alkaloid COR medium pass
BjunA06G0019800 Alkaloid COR medium pass
BjunA09G0014760 Alkaloid COR medium pass
BjunA09G0035650 Alkaloid COR medium pass
BjunB02G0003650 Alkaloid COR medium pass
BjunB04G0000920 Alkaloid COR medium pass
BjunB04G0013830 Alkaloid COR medium pass
BjunB06G0005220 Alkaloid COR low borderline
BjunB06G0005230 Alkaloid COR medium pass
BjunB06G0005240 Alkaloid COR medium pass
BjunB06G0005250 Alkaloid COR medium pass
BjunB08G0000090 Alkaloid COR medium pass
BjunB08G0017800 Alkaloid COR medium pass
BjunB08G0017810 Alkaloid COR medium pass
BjunB08G0044710 Alkaloid COR medium pass
BjunSuper_scaffold_182_2_9161900060560 Alkaloid COR medium pass
BjunA01G0010100 Alkaloid CYP719 medium borderline
BjunA01G0024780 Alkaloid CYP719 medium borderline
BjunA06G0029750 Alkaloid CYP719 low borderline
BjunA07G0025640 Alkaloid CYP719 medium borderline
BjunA08G0024710 Alkaloid CYP719 medium borderline
BjunA09G0049270 Alkaloid CYP719 medium borderline
BjunA09G0050140 Alkaloid CYP719 medium borderline
BjunB02G0047600 Alkaloid CYP719 medium borderline
BjunB02G0055960 Alkaloid CYP719 medium borderline
BjunB03G0037720 Alkaloid CYP719 medium borderline
BjunContig50520038400 Alkaloid CYP719 medium borderline
BjunSuper_scaffold_190_1654977_2549642_805423_8946660062240 Alkaloid CYP719 medium borderline
BjunSuper_scaffold_190_1654977_2549642_805423_8946660062270 Alkaloid CYP719 medium borderline
BjunA02G0001610 Alkaloid CYP80B1 medium borderline
BjunA02G0030880 Alkaloid CYP80B1 medium borderline
BjunA03G0023350 Alkaloid CYP80B1 medium borderline
BjunA04G0023170 Alkaloid CYP80B1 medium borderline
BjunA05G0008290 Alkaloid CYP80B1 medium borderline
BjunA06G0025190 Alkaloid CYP80B1 medium borderline
BjunA07G0023150 Alkaloid CYP80B1 low borderline
BjunB01G0004320 Alkaloid CYP80B1 medium borderline
BjunB01G0026760 Alkaloid CYP80B1 medium borderline
BjunB01G0038690 Alkaloid CYP80B1 low borderline
BjunB02G0033020 Alkaloid CYP80B1 medium borderline
BjunB02G0048300 Alkaloid CYP80B1 medium borderline
BjunB03G0035250 Alkaloid CYP80B1 low borderline