PlantSME Plant secondary metabolism enzyme database

Brassica juncea (brassica_juncea)

Imported from atlas release summary for Brassica juncea.

4298
Candidate Protein Records
3334
Pathway-Level Records
8339
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1088 19 BAHD (493) View species results
Alkaloid pathway 695 23 NMT (133) View species results
Phenylpropanoid pathway 689 11 POD (300) View species results
Flavonoid pathway 411 14 UFGT (250) View species results
Rosmarinic acid pathway 257 7 C4H (88) View species results
Steroid pathway 194 12 SMT1/SMT2/SMT3 (76) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3016 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 723 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
BjunA09G0033980 Alkaloid LAMT medium borderline
BjunA09G0044960 Alkaloid LAMT medium borderline
BjunA10G0009280 Alkaloid LAMT medium borderline
BjunA10G0023640 Alkaloid LAMT medium borderline
BjunA10G0023650 Alkaloid LAMT medium borderline
BjunB01G0001150 Alkaloid LAMT medium borderline
BjunB01G0033780 Alkaloid LAMT low borderline
BjunB02G0012990 Alkaloid LAMT medium borderline
BjunB02G0014020 Alkaloid LAMT medium borderline
BjunB02G0033710 Alkaloid LAMT medium borderline
BjunB02G0033730 Alkaloid LAMT medium borderline
BjunB02G0055480 Alkaloid LAMT medium borderline
BjunB03G0024150 Alkaloid LAMT medium borderline
BjunB03G0030090 Alkaloid LAMT low borderline
BjunB03G0035910 Alkaloid LAMT medium borderline
BjunB03G0040370 Alkaloid LAMT low borderline
BjunB04G0016600 Alkaloid LAMT medium borderline
BjunB05G0002600 Alkaloid LAMT medium borderline
BjunB05G0021370 Alkaloid LAMT medium borderline
BjunB05G0026500 Alkaloid LAMT medium borderline
BjunB05G0037550 Alkaloid LAMT medium borderline
BjunB06G0013830 Alkaloid LAMT medium borderline
BjunB06G0016090 Alkaloid LAMT medium borderline
BjunB06G0016100 Alkaloid LAMT medium borderline
BjunB06G0016110 Alkaloid LAMT medium borderline
BjunB06G0032650 Alkaloid LAMT medium borderline
BjunB07G0023420 Alkaloid LAMT medium borderline
BjunContig5030038380 Alkaloid LAMT medium borderline
BjunSuper_scaffold_182_2_9161900060380 Alkaloid LAMT low borderline
BjunSuper_scaffold_198_2714654_27595840062680 Alkaloid LAMT medium borderline
BjunSuper_scaffold_199_1693331_32295160063460 Alkaloid LAMT medium borderline
BjunSuper_scaffold_820073850 Alkaloid LAMT medium borderline
BjunA01G0018250 Alkaloid MPO medium pass
BjunA01G0028510 Alkaloid MPO medium pass
BjunA02G0023740 Alkaloid MPO medium pass
BjunA02G0023750 Alkaloid MPO medium pass
BjunA03G0018480 Alkaloid MPO high pass
BjunA08G0008230 Alkaloid MPO medium pass
BjunA09G0026160 Alkaloid MPO low borderline
BjunA09G0029910 Alkaloid MPO low borderline
BjunB01G0004030 Alkaloid MPO high pass
BjunB05G0049490 Alkaloid MPO medium pass
BjunB08G0022910 Alkaloid MPO high pass
BjunSuper_scaffold_182_2_9161900060180 Alkaloid MPO medium pass
BjunA01G0010150 Alkaloid NCS medium borderline
BjunA01G0019920 Alkaloid NCS medium borderline
BjunA05G0017590 Alkaloid NCS medium borderline
BjunA06G0017810 Alkaloid NCS medium borderline
BjunA08G0001930 Alkaloid NCS medium borderline
BjunA08G0008410 Alkaloid NCS medium borderline