PlantSME Plant secondary metabolism enzyme database

Brassica juncea (brassica_juncea)

Imported from atlas release summary for Brassica juncea.

3334
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1088 19 BAHD (493) View species results
Alkaloid pathway 695 23 NMT (133) View species results
Phenylpropanoid pathway 689 11 POD (300) View species results
Flavonoid pathway 411 14 UFGT (250) View species results
Rosmarinic acid pathway 257 7 C4H (88) View species results
Steroid pathway 194 12 SMT1/SMT2/SMT3 (76) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3016 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 723 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
BjunB01G0007870 Alkaloid 7DLGT medium pass
BjunB01G0009480 Alkaloid 7DLGT low borderline
BjunB01G0011390 Alkaloid 7DLGT medium pass
BjunB01G0011400 Alkaloid 7DLGT low borderline
BjunB01G0011430 Alkaloid 7DLGT low borderline
BjunB01G0011440 Alkaloid 7DLGT low borderline
BjunB01G0011450 Alkaloid 7DLGT low borderline
BjunB01G0011460 Alkaloid 7DLGT low borderline
BjunB01G0013430 Alkaloid 7DLGT medium pass
BjunB01G0016800 Alkaloid 7DLGT medium pass
BjunB01G0024940 Alkaloid 7DLGT low borderline
BjunB01G0030160 Alkaloid 7DLGT medium pass
BjunB01G0033910 Alkaloid 7DLGT low borderline
BjunB02G0000570 Alkaloid 7DLGT low borderline
BjunB02G0001300 Alkaloid 7DLGT low borderline
BjunB02G0005950 Alkaloid 7DLGT low borderline
BjunB02G0005960 Alkaloid 7DLGT medium pass
BjunB02G0007160 Alkaloid 7DLGT low borderline
BjunB02G0008800 Alkaloid 7DLGT medium pass
BjunB02G0010820 Alkaloid 7DLGT low borderline
BjunB02G0017140 Alkaloid 7DLGT low borderline
BjunB02G0021230 Alkaloid 7DLGT medium pass
BjunB02G0026570 Alkaloid 7DLGT low borderline
BjunB02G0026860 Alkaloid 7DLGT low borderline
BjunB02G0032560 Alkaloid 7DLGT medium pass
BjunB02G0032570 Alkaloid 7DLGT high pass
BjunB02G0032580 Alkaloid 7DLGT high pass
BjunB02G0043110 Alkaloid 7DLGT medium pass
BjunB02G0043120 Alkaloid 7DLGT medium pass
BjunB02G0045980 Alkaloid 7DLGT low borderline
BjunB02G0046020 Alkaloid 7DLGT low borderline
BjunB02G0046080 Alkaloid 7DLGT medium pass
BjunB03G0001140 Alkaloid 7DLGT low borderline
BjunB03G0001160 Alkaloid 7DLGT low borderline
BjunB03G0003300 Alkaloid 7DLGT low borderline
BjunB03G0014030 Alkaloid 7DLGT medium pass
BjunB03G0014480 Alkaloid 7DLGT low borderline
BjunB03G0014490 Alkaloid 7DLGT low borderline
BjunB03G0014500 Alkaloid 7DLGT low borderline
BjunB03G0014830 Alkaloid 7DLGT low borderline
BjunB03G0014840 Alkaloid 7DLGT low borderline
BjunB03G0014850 Alkaloid 7DLGT low borderline
BjunB03G0023280 Alkaloid 7DLGT medium pass
BjunB03G0023350 Alkaloid 7DLGT medium pass
BjunB03G0023940 Alkaloid 7DLGT low borderline
BjunB03G0024950 Alkaloid 7DLGT medium pass
BjunB03G0024960 Alkaloid 7DLGT medium pass
BjunB03G0024970 Alkaloid 7DLGT medium pass
BjunB03G0028500 Alkaloid 7DLGT medium pass
BjunB03G0030500 Alkaloid 7DLGT low borderline