PlantSME Plant secondary metabolism enzyme database

Brassica juncea (brassica_juncea)

Imported from atlas release summary for Brassica juncea.

4298
Candidate Protein Records
3334
Pathway-Level Records
8339
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1088 19 BAHD (493) View species results
Alkaloid pathway 695 23 NMT (133) View species results
Phenylpropanoid pathway 689 11 POD (300) View species results
Flavonoid pathway 411 14 UFGT (250) View species results
Rosmarinic acid pathway 257 7 C4H (88) View species results
Steroid pathway 194 12 SMT1/SMT2/SMT3 (76) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3016 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 723 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
BjunB06G0000060 Alkaloid TRI/TRII medium pass
BjunB06G0000090 Alkaloid TRI/TRII medium pass
BjunB06G0005460 Alkaloid TRI/TRII medium pass
BjunB06G0014330 Alkaloid TRI/TRII medium pass
BjunB06G0034080 Alkaloid TRI/TRII medium pass
BjunB06G0036300 Alkaloid TRI/TRII low borderline
BjunB06G0036310 Alkaloid TRI/TRII low borderline
BjunB07G0010440 Alkaloid TRI/TRII low borderline
BjunB07G0019290 Alkaloid TRI/TRII medium pass
BjunB07G0023020 Alkaloid TRI/TRII medium pass
BjunB08G0002830 Alkaloid TRI/TRII low borderline
BjunB08G0026930 Alkaloid TRI/TRII low borderline
BjunB08G0031800 Alkaloid TRI/TRII medium pass
BjunB08G0032480 Alkaloid TRI/TRII medium pass
BjunB08G0039480 Alkaloid TRI/TRII medium pass
BjunB08G0041350 Alkaloid TRI/TRII medium pass
BjunContig106620001160 Alkaloid TRI/TRII medium pass
BjunContig118_1274036_2398663_875207_991546_26974_1163400002750 Alkaloid TRI/TRII low borderline
BjunContig118_1274036_2398663_875207_991546_26974_1163400002770 Alkaloid TRI/TRII medium pass
BjunContig176_1863893_2424353_437358_5604610013330 Alkaloid TRI/TRII low borderline
BjunContig32400025860 Alkaloid TRI/TRII medium pass
BjunContig5560041080 Alkaloid TRI/TRII medium pass
BjunContig73030047360 Alkaloid TRI/TRII medium pass
BjunContig90340051850 Alkaloid TRI/TRII medium pass
BjunSuper_scaffold_750071760 Alkaloid TRI/TRII medium pass
BjunSuper_scaffold_750071790 Alkaloid TRI/TRII medium pass
BjunSuper_scaffold_750071800 Alkaloid TRI/TRII medium pass
BjunSuper_scaffold_750071830 Alkaloid TRI/TRII medium pass
BjunA09G0045370 Alkaloid TYDC_DDC medium borderline
BjunB01G0022900 Alkaloid TYDC_DDC medium borderline
BjunB02G0003270 Alkaloid TYDC_DDC medium borderline
BjunB04G0018040 Alkaloid TYDC_DDC medium borderline
BjunB05G0008680 Alkaloid TYDC_DDC medium borderline
BjunA02G0013080 Alkaloid XMT_MXMT_DXMT medium borderline
BjunA02G0014800 Alkaloid XMT_MXMT_DXMT medium borderline
BjunA02G0026760 Alkaloid XMT_MXMT_DXMT low borderline
BjunA08G0014840 Alkaloid XMT_MXMT_DXMT medium borderline
BjunA08G0017320 Alkaloid XMT_MXMT_DXMT medium borderline
BjunA09G0044090 Alkaloid XMT_MXMT_DXMT low borderline
BjunB01G0033830 Alkaloid XMT_MXMT_DXMT medium borderline
BjunB02G0004730 Alkaloid XMT_MXMT_DXMT low borderline
BjunB03G0046690 Alkaloid XMT_MXMT_DXMT low borderline
BjunB04G0006770 Alkaloid XMT_MXMT_DXMT low borderline
BjunB06G0024320 Alkaloid XMT_MXMT_DXMT low borderline
BjunB08G0042480 Alkaloid XMT_MXMT_DXMT medium borderline
BjunContig197_1_5304640014530 Alkaloid XMT_MXMT_DXMT medium borderline
BjunContig429_2167249_2323184_2780_800000032950 Alkaloid XMT_MXMT_DXMT medium borderline
BjunContig88540051330 Alkaloid XMT_MXMT_DXMT medium borderline
BjunA01G0008730 Flavonoid 4CL medium pass
BjunA01G0012180 Flavonoid 4CL low borderline