PlantSME Plant secondary metabolism enzyme database

Citrus grandis (citrus_grandis)

Imported from atlas release summary for Citrus grandis.

2318
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 687 19 BAHD (281) View species results
Alkaloid pathway 590 26 GES (105) View species results
Phenylpropanoid pathway 388 11 POD (171) View species results
Flavonoid pathway 262 8 UFGT (152) View species results
Rosmarinic acid pathway 222 7 C4H (80) View species results
Steroid pathway 169 13 CAS (107) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2050 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 458 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
Reset
Gene Pathway Family Confidence Status
CIgra01G0004910.1 Rosmarinic Acid C4H low borderline
CIgra01G0004910.2 Rosmarinic Acid C4H low borderline
CIgra01G0005100.1 Rosmarinic Acid C4H low borderline
CIgra01G0005100.2 Rosmarinic Acid C4H low borderline
CIgra01G0005130.1 Rosmarinic Acid C4H medium pass
CIgra01G0006010.1 Rosmarinic Acid C4H low borderline
CIgra01G0006030.1 Rosmarinic Acid C4H medium pass
CIgra01G0006040.1 Rosmarinic Acid C4H medium pass
CIgra01G0009640.2 Rosmarinic Acid C4H low borderline
CIgra01G0009640.3 Rosmarinic Acid C4H low borderline
CIgra01G0010610.1 Rosmarinic Acid C4H low borderline
CIgra01G0010620.1 Rosmarinic Acid C4H medium pass
CIgra01G0010650.1 Rosmarinic Acid C4H medium pass
CIgra01G0021450.1 Rosmarinic Acid C4H medium pass
CIgra01G0021450.2 Rosmarinic Acid C4H medium pass
CIgra01G0021450.3 Rosmarinic Acid C4H medium pass
CIgra01G0022000.1 Rosmarinic Acid C4H medium pass
CIgra01G0024060.1 Rosmarinic Acid C4H medium pass
CIgra01G0024350.1 Rosmarinic Acid C4H medium pass
CIgra01G0024360.1 Rosmarinic Acid C4H low borderline
CIgra01G0026860.1 Rosmarinic Acid C4H low borderline
CIgra01G0026920.1 Rosmarinic Acid C4H low borderline
CIgra01G0026940.1 Rosmarinic Acid C4H medium pass
CIgra01G0027810.1 Rosmarinic Acid C4H low borderline
CIgra01G0028130.1 Rosmarinic Acid C4H medium pass
CIgra01G0028170.1 Rosmarinic Acid C4H medium pass
CIgra01G0028180.1 Rosmarinic Acid C4H medium pass
CIgra01G0028220.1 Rosmarinic Acid C4H medium pass
CIgra01G0028500.1 Rosmarinic Acid C4H low borderline
CIgra01G0028520.1 Rosmarinic Acid C4H low borderline
CIgra01G0028530.1 Rosmarinic Acid C4H low borderline
CIgra01G0028560.1 Rosmarinic Acid C4H low borderline
CIgra02G0000350.1 Rosmarinic Acid C4H low borderline
CIgra02G0001030.1 Rosmarinic Acid C4H medium pass
CIgra02G0001040.1 Rosmarinic Acid C4H medium pass
CIgra02G0002440.1 Rosmarinic Acid C4H low borderline
CIgra02G0002440.2 Rosmarinic Acid C4H low borderline
CIgra02G0002440.3 Rosmarinic Acid C4H low borderline
CIgra02G0002450.1 Rosmarinic Acid C4H low borderline
CIgra02G0002460.1 Rosmarinic Acid C4H low borderline
CIgra02G0003040.1 Rosmarinic Acid C4H low borderline
CIgra02G0005150.1 Rosmarinic Acid C4H medium pass
CIgra02G0007390.1 Rosmarinic Acid C4H low borderline
CIgra02G0007710.1 Rosmarinic Acid C4H low borderline
CIgra02G0011010.1 Rosmarinic Acid C4H low borderline
CIgra02G0011750.1 Rosmarinic Acid C4H low borderline
CIgra02G0020110.1 Rosmarinic Acid C4H low borderline
CIgra02G0020130.1 Rosmarinic Acid C4H medium pass
CIgra02G0020140.1 Rosmarinic Acid C4H low borderline
CIgra02G0024650.1 Rosmarinic Acid C4H low borderline