PlantSME Plant secondary metabolism enzyme database

Citrus grandis (citrus_grandis)

Imported from atlas release summary for Citrus grandis.

2318
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 687 19 BAHD (281) View species results
Alkaloid pathway 590 26 GES (105) View species results
Phenylpropanoid pathway 388 11 POD (171) View species results
Flavonoid pathway 262 8 UFGT (152) View species results
Rosmarinic acid pathway 222 7 C4H (80) View species results
Steroid pathway 169 13 CAS (107) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2050 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 458 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
CIgra02G0025550.1 Rosmarinic Acid C4H low borderline
CIgra02G0025580.1 Rosmarinic Acid C4H medium pass
CIgra02G0025670.1 Rosmarinic Acid C4H medium pass
CIgra02G0025690.1 Rosmarinic Acid C4H low borderline
CIgra02G0025700.1 Rosmarinic Acid C4H medium pass
CIgra02G0025710.1 Rosmarinic Acid C4H medium pass
CIgra02G0025720.1 Rosmarinic Acid C4H medium pass
CIgra02G0025880.1 Rosmarinic Acid C4H low borderline
CIgra02G0026440.1 Rosmarinic Acid C4H low borderline
CIgra02G0026450.1 Rosmarinic Acid C4H low borderline
CIgra02G0026560.1 Rosmarinic Acid C4H low borderline
CIgra02G0026620.1 Rosmarinic Acid C4H medium pass
CIgra02G0026850.1 Rosmarinic Acid C4H low borderline
CIgra02G0026870.1 Rosmarinic Acid C4H low borderline
CIgra02G0031590.1 Rosmarinic Acid C4H low borderline
CIgra02G0032680.1 Rosmarinic Acid C4H medium pass
CIgra02G0032990.1 Rosmarinic Acid C4H low borderline
CIgra02G0033030.1 Rosmarinic Acid C4H low borderline
CIgra02G0033030.2 Rosmarinic Acid C4H low borderline
CIgra02G0033040.1 Rosmarinic Acid C4H low borderline
CIgra02G0033280.1 Rosmarinic Acid C4H medium pass
CIgra02G0033300.1 Rosmarinic Acid C4H low borderline
CIgra02G0033310.1 Rosmarinic Acid C4H medium pass
CIgra02G0035420.1 Rosmarinic Acid C4H low borderline
CIgra02G0040110.1 Rosmarinic Acid C4H low borderline
CIgra02G0040230.1 Rosmarinic Acid C4H low borderline
CIgra02G0043880.1 Rosmarinic Acid C4H medium pass
CIgra02G0044740.1 Rosmarinic Acid C4H low borderline
CIgra02G0046280.1 Rosmarinic Acid C4H low borderline
CIgra03G0000770.1 Rosmarinic Acid C4H low borderline
CIgra03G0000780.1 Rosmarinic Acid C4H low borderline
CIgra03G0000790.1 Rosmarinic Acid C4H low borderline
CIgra03G0001470.1 Rosmarinic Acid C4H low borderline
CIgra03G0001480.1 Rosmarinic Acid C4H low borderline
CIgra03G0002160.1 Rosmarinic Acid C4H low borderline
CIgra03G0004680.1 Rosmarinic Acid C4H low borderline
CIgra03G0005190.1 Rosmarinic Acid C4H medium pass
CIgra03G0008030.1 Rosmarinic Acid C4H low borderline
CIgra03G0008040.1 Rosmarinic Acid C4H low borderline
CIgra03G0008070.1 Rosmarinic Acid C4H low borderline
CIgra03G0008080.1 Rosmarinic Acid C4H medium pass
CIgra03G0008090.1 Rosmarinic Acid C4H low borderline
CIgra03G0008100.1 Rosmarinic Acid C4H low borderline
CIgra03G0008110.1 Rosmarinic Acid C4H low borderline
CIgra03G0008130.1 Rosmarinic Acid C4H low borderline
CIgra03G0008140.1 Rosmarinic Acid C4H low borderline
CIgra03G0008470.1 Rosmarinic Acid C4H low borderline
CIgra03G0009000.1 Rosmarinic Acid C4H medium pass
CIgra03G0017910.1 Rosmarinic Acid C4H low borderline
CIgra03G0018260.1 Rosmarinic Acid C4H low borderline