PlantSME Plant secondary metabolism enzyme database

Citrus grandis (citrus_grandis)

Imported from atlas release summary for Citrus grandis.

2318
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 687 19 BAHD (281) View species results
Alkaloid pathway 590 26 GES (105) View species results
Phenylpropanoid pathway 388 11 POD (171) View species results
Flavonoid pathway 262 8 UFGT (152) View species results
Rosmarinic acid pathway 222 7 C4H (80) View species results
Steroid pathway 169 13 CAS (107) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2050 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 458 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
CIgra08G0024690.1 Alkaloid 7DLGT low borderline
CIgra08G0024700.1 Alkaloid 7DLGT low borderline
CIgra08G0024720.1 Alkaloid 7DLGT low borderline
CIgra09G0012640.1 Alkaloid 7DLGT medium pass
CIgra09G0012650.1 Alkaloid 7DLGT medium pass
CIgra09G0014370.1 Alkaloid 7DLGT low borderline
CIgra09G0014500.1 Alkaloid 7DLGT low borderline
CIgra09G0014580.1 Alkaloid 7DLGT low borderline
CIgra09G0016740.1 Alkaloid 7DLGT high pass
CIgra09G0016850.1 Alkaloid 7DLGT low borderline
CIgra09G0016910.1 Alkaloid 7DLGT medium pass
CIgra09G0017020.1 Alkaloid 7DLGT low borderline
CIgra09G0020110.1 Alkaloid 7DLGT low borderline
CIgra09G0026130.1 Alkaloid 7DLGT high pass
CIgra09G0026140.1 Alkaloid 7DLGT medium pass
CIgra09G0027850.1 Alkaloid 7DLGT medium pass
CIgra09G0027860.1 Alkaloid 7DLGT low borderline
CIgra09G0027920.1 Alkaloid 7DLGT medium pass
CIgra09G0027930.1 Alkaloid 7DLGT medium pass
CIgra09G0027970.1 Alkaloid 7DLGT medium pass
CIgraUnG0002730.1 Alkaloid 7DLGT low borderline
CIgraUnG0002840.1 Alkaloid 7DLGT low borderline
CIgraUnG0004770.1 Alkaloid 7DLGT medium pass
CIgraUnG0004780.1 Alkaloid 7DLGT medium pass
CIgraUnG0004790.1 Alkaloid 7DLGT low borderline
CIgraUnG0020170.1 Alkaloid 7DLGT low borderline
CIgraUnG0020270.1 Alkaloid 7DLGT medium pass
CIgra01G0027350.1 Alkaloid 7DLH medium borderline
CIgra01G0027390.1 Alkaloid 7DLH medium borderline
CIgra01G0027450.1 Alkaloid 7DLH medium borderline
CIgra01G0027510.1 Alkaloid 7DLH medium borderline
CIgra01G0027540.1 Alkaloid 7DLH medium borderline
CIgra02G0007350.1 Alkaloid 7DLH medium borderline
CIgra02G0007360.1 Alkaloid 7DLH medium borderline
CIgra02G0011750.1 Alkaloid 7DLH medium borderline
CIgra02G0031590.1 Alkaloid 7DLH medium borderline
CIgra03G0022460.1 Alkaloid 7DLH medium borderline
CIgra04G0018820.1 Alkaloid 7DLH medium borderline
CIgra04G0018820.2 Alkaloid 7DLH medium borderline
CIgra05G0002560.1 Alkaloid 7DLH medium borderline
CIgra05G0015740.1 Alkaloid 7DLH medium borderline
CIgra05G0015750.1 Alkaloid 7DLH medium borderline
CIgra05G0015870.1 Alkaloid 7DLH medium borderline
CIgra05G0015880.1 Alkaloid 7DLH medium borderline
CIgra05G0015890.1 Alkaloid 7DLH medium borderline
CIgra05G0015930.1 Alkaloid 7DLH medium borderline
CIgra05G0015940.1 Alkaloid 7DLH medium borderline
CIgra05G0015960.1 Alkaloid 7DLH medium borderline
CIgra05G0015980.1 Alkaloid 7DLH medium borderline
CIgra05G0016000.1 Alkaloid 7DLH medium borderline