PlantSME Plant secondary metabolism enzyme database

Citrus grandis (citrus_grandis)

Imported from atlas release summary for Citrus grandis.

2318
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 687 19 BAHD (281) View species results
Alkaloid pathway 590 26 GES (105) View species results
Phenylpropanoid pathway 388 11 POD (171) View species results
Flavonoid pathway 262 8 UFGT (152) View species results
Rosmarinic acid pathway 222 7 C4H (80) View species results
Steroid pathway 169 13 CAS (107) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2050 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 458 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
CIgra05G0016000.2 Alkaloid 7DLH medium borderline
CIgra05G0016000.3 Alkaloid 7DLH medium borderline
CIgra05G0016000.4 Alkaloid 7DLH medium borderline
CIgra05G0034400.1 Alkaloid 7DLH low borderline
CIgra06G0015960.1 Alkaloid 7DLH medium borderline
CIgra07G0004190.1 Alkaloid 7DLH medium borderline
CIgra07G0008080.1 Alkaloid 7DLH medium borderline
CIgra07G0008080.2 Alkaloid 7DLH medium pass
CIgra07G0009780.1 Alkaloid 7DLH medium borderline
CIgra07G0015900.2 Alkaloid 7DLH medium borderline
CIgra07G0015920.1 Alkaloid 7DLH medium borderline
CIgra07G0015930.2 Alkaloid 7DLH medium borderline
CIgra07G0015930.4 Alkaloid 7DLH medium borderline
CIgra08G0023860.1 Alkaloid 7DLH medium borderline
CIgra09G0026950.1 Alkaloid 7DLH medium borderline
CIgraUnG0020460.1 Alkaloid 7DLH medium borderline
CIgra03G0014670.1 Alkaloid 8HGO medium borderline
CIgra03G0017870.1 Alkaloid 8HGO medium borderline
CIgra03G0017870.2 Alkaloid 8HGO medium borderline
CIgra03G0017870.3 Alkaloid 8HGO medium borderline
CIgra03G0017890.1 Alkaloid 8HGO medium pass
CIgra03G0017900.1 Alkaloid 8HGO medium borderline
CIgra03G0024890.1 Alkaloid 8HGO medium borderline
CIgra05G0020880.1 Alkaloid 8HGO medium borderline
CIgra05G0020880.2 Alkaloid 8HGO medium borderline
CIgra05G0032800.1 Alkaloid 8HGO medium borderline
CIgra05G0033090.1 Alkaloid 8HGO medium borderline
CIgra06G0007540.1 Alkaloid 8HGO medium borderline
CIgra06G0007560.1 Alkaloid 8HGO medium pass
CIgra06G0007570.1 Alkaloid 8HGO medium borderline
CIgra06G0007590.1 Alkaloid 8HGO medium borderline
CIgra06G0007600.1 Alkaloid 8HGO medium borderline
CIgra07G0012820.1 Alkaloid 8HGO medium borderline
CIgraUnG0019140.1 Alkaloid 8HGO medium pass
CIgra02G0013330.2 Alkaloid ADC low borderline
CIgra02G0013330.3 Alkaloid ADC low borderline
CIgra02G0013330.4 Alkaloid ADC low borderline
CIgra08G0008840.1 Alkaloid ADC medium pass
CIgra01G0015430.1 Alkaloid BBE medium borderline
CIgra01G0015480.1 Alkaloid BBE medium borderline
CIgra01G0027340.1 Alkaloid BBE medium borderline
CIgra01G0027380.1 Alkaloid BBE medium borderline
CIgra01G0027440.1 Alkaloid BBE medium borderline
CIgra01G0027500.1 Alkaloid BBE medium borderline
CIgra02G0014010.1 Alkaloid BBE medium borderline
CIgra02G0014020.1 Alkaloid BBE medium borderline
CIgra02G0014030.1 Alkaloid BBE medium borderline
CIgra02G0038700.1 Alkaloid BBE medium borderline
CIgra02G0038720.1 Alkaloid BBE medium borderline
CIgra02G0038730.1 Alkaloid BBE medium borderline