PlantSME Plant secondary metabolism enzyme database

Fragaria ananassa (fragaria_ananassa)

Imported from atlas release summary for Fragaria ananassa.

6888
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
POD 654 3.51% CYP76 643 3.45% F3H 516 2.77% T3O 492 2.64% NMT 459 2.46% DWF4/CYP90B1 383 2.06% STR 380 2.04% BR6OX2/CYP85A2 367 1.97% F3'H/CYP75B 354 1.9% CAD 323 1.73% CODM/T6ODM 319 1.71% H6H 319 1.71% CAS 265 1.42% TPS 257 1.38% SMT1/SMT2/SMT3 252 1.35% CSE 240 1.29% GES 229 1.23% CYP71 195 1.05% CYP90D1 188 1.01% TRI/TRII 187 1.0% 7DLH 182 0.98% GS 177 0.95% LAC 177 0.95% HCT 173 0.93% IFR 168 0.9% T16H 164 0.88% G8O/G8H 160 0.86% SLS 155 0.83% IO 149 0.8% TAT 146 0.78% F5H/CYP84A 142 0.76% FNS 131 0.7% PYKS 130 0.7% PMT 121 0.65% CCR 121 0.65% SGD 119 0.64% F3'5'H/CYP75A 118 0.63% COMT 118 0.63% RAS 110 0.59% ANR 106 0.57% BR6OX1/CYP85A1 94 0.5% COR 90 0.48% DFR 89 0.48% BBE 83 0.45% SQE 77 0.41% NCS 73 0.39% LAMT 72 0.39% ANS/LDOX 71 0.38% CPD/CYP90A1 66 0.35% 8HGO 63 0.34% PAL 60 0.32% 16OMT 58 0.31% ROT3/CYP90C1 53 0.28% CCoAOMT 52 0.28% CNMT 49 0.26% AACT 48 0.26% HMGR 47 0.25% FPPS 43 0.23% MPO 42 0.23% CHS 37 0.2% ISY 34 0.18% CPR 34 0.18% SQS/FDFT1 34 0.18% CYP51G1 34 0.18% MVK 33 0.18% DET2 32 0.17% HPPR 27 0.14% CYP719 26 0.14% TYDC_DDC 26 0.14% GGPPS 24 0.13% MVD 24 0.13% CYP80B1 23 0.12% SMO1/SMO2 22 0.12% DXS 22 0.12% MCT/IspD 18 0.1% 6OMT_4OMT_SOMT 16 0.09% ADC 14 0.08% CHI 14 0.08% IDI 14 0.08% DWF1 13 0.07% TDC 11 0.06% ODC 10 0.05% PMK 10 0.05% DWF5 9 0.05% CMK/IspE 9 0.05% DXR 9 0.05% HYD1 8 0.04% HMGS 8 0.04% CPI1 7 0.04% FK 7 0.04% HDS/IspG 7 0.04% MDS/IspF 7 0.04% FLS 6 0.03% DWF7 6 0.03% HDR/IspH 6 0.03% CYP80F1 4 0.02% XMT_MXMT_DXMT 4 0.02% GPPS 3 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 2064 19 BAHD (739) View species results
Alkaloid pathway 1625 26 7DLGT (289) View species results
Phenylpropanoid pathway 1318 12 POD (533) View species results
Flavonoid pathway 924 14 UFGT (635) View species results
Rosmarinic acid pathway 482 7 C4H (166) View species results
Steroid pathway 475 15 CAS (191) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6875 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1366 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
Reset
Gene Pathway Family Confidence Status Best Target
FanaFAN_r2.3ch00001020 Terpenoid BAHD low borderline BAHD__00023__sp_O22975_LPAAT_ARATH
FanaFAN_r2.3ch00001610 Terpenoid BAHD medium pass BAHD__00014__sp_B9RK42_GPC1_RICCO
FanaFAN_r2.3ch00003680 Terpenoid BAHD medium pass BAHD__00021__sp_K7K424_DAT2D_SOYBN
FanaFAN_r2.3ch00003820 Terpenoid BAHD medium pass BAHD__00085__sp_Q9M1K5_ZDH13_ARATH
FanaFAN_r2.3ch00004750 Terpenoid BAHD medium pass BAHD__00090__sp_Q9SHJ5_GPAT1_ARATH
FanaFAN_r2.3ch00006640 Terpenoid BAHD medium pass BAHD__00005__sp_A0A161IUT7_DGAT1_CORAE
FanaFAN_r2.3ch00012210 Terpenoid BAHD medium pass BAHD__00077__sp_Q9FNA9_PDAT1_ARATH
FanaFAN_r2.3ch00012680 Terpenoid BAHD medium pass BAHD__00014__sp_B9RK42_GPC1_RICCO
FanaFAN_r2.3ch00018620 Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
FanaFAN_r2.3ch00018630 Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
FanaFAN_r2.3ch00018640 Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
FanaFAN_r2.3ch00019410 Terpenoid BAHD medium pass BAHD__00084__sp_Q9M115_ZDH16_ARATH
FanaFAN_r2.3ch00019870 Terpenoid BAHD low borderline BAHD__00073__sp_Q9FF86_DCR_ARATH
FanaFAN_r2.3ch00020080 Terpenoid BAHD medium pass BAHD__00005__sp_A0A161IUT7_DGAT1_CORAE
FanaFAN_r2.3ch00020980 Terpenoid BAHD medium pass BAHD__00005__sp_A0A161IUT7_DGAT1_CORAE
FanaFAN_r2.3ch00022980 Terpenoid BAHD medium pass BAHD__00049__sp_Q5PNZ1_ZDH21_ARATH
FanaFAN_r2.3ch00024040 Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
FanaFAN_r2.3ch00024060 Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
FanaFAN_r2.3ch00024090 Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
FanaFAN_r2.3ch00024110 Terpenoid BAHD low borderline BAHD__00073__sp_Q9FF86_DCR_ARATH
FanaFAN_r2.3ch00024120 Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
FanaFAN_r2.3ch00027150 Terpenoid BAHD medium pass BAHD__00007__sp_A0A2Z5CVK5_AT2_CROXC
FanaFAN_r2.3ch00027640 Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
FanaFAN_r2.3ch00027660 Terpenoid BAHD low borderline BAHD__00016__sp_D4NUX0_HCT1_ACTRA
FanaFAN_r2.3ch00030500 Terpenoid BAHD medium pass BAHD__00021__sp_K7K424_DAT2D_SOYBN
FanaFAN_r2.3ch00030580 Terpenoid BAHD medium pass BAHD__00097__sp_Q9ZV87_NAPES_ARATH
FanaFAN_r2.3ch00031030 Terpenoid BAHD medium pass BAHD__00051__sp_Q7XA86_ZDH11_ARATH
FanaFAN_r2.3ch00031040 Terpenoid BAHD medium pass BAHD__00051__sp_Q7XA86_ZDH11_ARATH
FanaFAN_r2.3ch00031600 Terpenoid BAHD medium pass BAHD__00092__sp_Q9SU91_LPXA_ARATH
FanaFAN_r2.3ch00034140 Terpenoid BAHD medium pass BAHD__00085__sp_Q9M1K5_ZDH13_ARATH
FanaFAN_r2.3ch00035990 Terpenoid BAHD medium pass BAHD__00049__sp_Q5PNZ1_ZDH21_ARATH
FanaFAN_r2.3ch00037070 Terpenoid BAHD medium pass BAHD__00058__sp_Q8LG50_LPAT2_ARATH
FanaFAN_r2.3ch00038330 Terpenoid BAHD low borderline BAHD__00025__sp_O64810_SCP10_ARATH
FanaFAN_r2.3ch00038810 Terpenoid BAHD low borderline BAHD__00081__sp_Q9LJB4_5MAT_ARATH
FanaFAN_r2.3ch00039550 Terpenoid BAHD medium pass BAHD__00073__sp_Q9FF86_DCR_ARATH
FanaFAN_r2.3ch00040760 Terpenoid BAHD medium pass BAHD__00026__sp_O64811_SCP9_ARATH
FanaFAN_r2.3ch00040770 Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
FanaFAN_r2.3ch00040890 Terpenoid BAHD medium pass BAHD__00058__sp_Q8LG50_LPAT2_ARATH
FanaFAN_r2.3ch00041170 Terpenoid BAHD medium pass BAHD__00052__sp_Q8GWG0_GPAT9_ARATH
FanaFAN_r2.3ch00041930 Terpenoid BAHD low borderline BAHD__00081__sp_Q9LJB4_5MAT_ARATH
FanaFAN_r2.3ch00043040 Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
FanaFAN_r2.3ch00044400 Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
FanaFAN_r2.3ch00044850 Terpenoid BAHD low borderline BAHD__00055__sp_Q8H780_SCP13_ARATH
FanaFAN_r2.3ch00044860 Terpenoid BAHD low borderline BAHD__00025__sp_O64810_SCP10_ARATH
FanaFAN_r2.3ch00044930 Terpenoid BAHD medium pass BAHD__00024__sp_O23393_BIA1_ARATH
FanaFAN_r2.3ch00050600 Terpenoid BAHD medium pass BAHD__00025__sp_O64810_SCP10_ARATH
FanaFAN_r2.3ch00051600 Terpenoid BAHD low borderline BAHD__00032__sp_P0DO84_AT_STRNX
FanaFAN_r2.3ch00053640 Terpenoid BAHD medium pass BAHD__00052__sp_Q8GWG0_GPAT9_ARATH
FanaFAN_r2.3ch00055580 Terpenoid BAHD medium borderline BAHD__00044__sp_Q56WD9_THIK2_ARATH
FanaFAN_r2.3ch00058810 Terpenoid BAHD low borderline BAHD__00025__sp_O64810_SCP10_ARATH