PlantSME Plant secondary metabolism enzyme database

Fragaria ananassa (fragaria_ananassa)

Imported from atlas release summary for Fragaria ananassa.

6888
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
POD 654 3.51% CYP76 643 3.45% F3H 516 2.77% T3O 492 2.64% NMT 459 2.46% DWF4/CYP90B1 383 2.06% STR 380 2.04% BR6OX2/CYP85A2 367 1.97% F3'H/CYP75B 354 1.9% CAD 323 1.73% CODM/T6ODM 319 1.71% H6H 319 1.71% CAS 265 1.42% TPS 257 1.38% SMT1/SMT2/SMT3 252 1.35% CSE 240 1.29% GES 229 1.23% CYP71 195 1.05% CYP90D1 188 1.01% TRI/TRII 187 1.0% 7DLH 182 0.98% GS 177 0.95% LAC 177 0.95% HCT 173 0.93% IFR 168 0.9% T16H 164 0.88% G8O/G8H 160 0.86% SLS 155 0.83% IO 149 0.8% TAT 146 0.78% F5H/CYP84A 142 0.76% FNS 131 0.7% PYKS 130 0.7% PMT 121 0.65% CCR 121 0.65% SGD 119 0.64% F3'5'H/CYP75A 118 0.63% COMT 118 0.63% RAS 110 0.59% ANR 106 0.57% BR6OX1/CYP85A1 94 0.5% COR 90 0.48% DFR 89 0.48% BBE 83 0.45% SQE 77 0.41% NCS 73 0.39% LAMT 72 0.39% ANS/LDOX 71 0.38% CPD/CYP90A1 66 0.35% 8HGO 63 0.34% PAL 60 0.32% 16OMT 58 0.31% ROT3/CYP90C1 53 0.28% CCoAOMT 52 0.28% CNMT 49 0.26% AACT 48 0.26% HMGR 47 0.25% FPPS 43 0.23% MPO 42 0.23% CHS 37 0.2% ISY 34 0.18% CPR 34 0.18% SQS/FDFT1 34 0.18% CYP51G1 34 0.18% MVK 33 0.18% DET2 32 0.17% HPPR 27 0.14% CYP719 26 0.14% TYDC_DDC 26 0.14% GGPPS 24 0.13% MVD 24 0.13% CYP80B1 23 0.12% SMO1/SMO2 22 0.12% DXS 22 0.12% MCT/IspD 18 0.1% 6OMT_4OMT_SOMT 16 0.09% ADC 14 0.08% CHI 14 0.08% IDI 14 0.08% DWF1 13 0.07% TDC 11 0.06% ODC 10 0.05% PMK 10 0.05% DWF5 9 0.05% CMK/IspE 9 0.05% DXR 9 0.05% HYD1 8 0.04% HMGS 8 0.04% CPI1 7 0.04% FK 7 0.04% HDS/IspG 7 0.04% MDS/IspF 7 0.04% FLS 6 0.03% DWF7 6 0.03% HDR/IspH 6 0.03% CYP80F1 4 0.02% XMT_MXMT_DXMT 4 0.02% GPPS 3 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 2064 19 BAHD (739) View species results
Alkaloid pathway 1625 26 7DLGT (289) View species results
Phenylpropanoid pathway 1318 12 POD (533) View species results
Flavonoid pathway 924 14 UFGT (635) View species results
Rosmarinic acid pathway 482 7 C4H (166) View species results
Steroid pathway 475 15 CAS (191) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6875 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1366 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Gene Pathway Family Confidence Status Best Target
FanaFAN_r2.3ch00063460 Terpenoid BAHD medium pass BAHD__00041__sp_Q4VCM1_LCAT2_ARATH
FanaFAN_r2.3ch00064360 Terpenoid BAHD medium pass BAHD__00089__sp_Q9SB58_ZDH19_ARATH
FanaFAN_r2.3ch00064920 Terpenoid BAHD low borderline BAHD__00026__sp_O64811_SCP9_ARATH
FanaFAN_r2.3ch00064930 Terpenoid BAHD low borderline BAHD__00025__sp_O64810_SCP10_ARATH
FanaFAN_r2.3ch00064940 Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
FanaFAN_r2.3ch00065650 Terpenoid BAHD medium pass BAHD__00026__sp_O64811_SCP9_ARATH
FanaFAN_r2.3ch00068310 Terpenoid BAHD medium pass BAHD__00023__sp_O22975_LPAAT_ARATH
FanaFAN_r2.3ch00068570 Terpenoid BAHD medium pass BAHD__00002__sp_A0A068BIF1_AT9_ACTER
FanaFAN_r2.3ch00069850 Terpenoid BAHD medium pass BAHD__00057__sp_Q8L7R3_LPCT1_ARATH
FanaFAN_r2.3ch00071620 Terpenoid BAHD low borderline BAHD__00023__sp_O22975_LPAAT_ARATH
FanaFAN_r2.3ch00071840 Terpenoid BAHD medium pass BAHD__00002__sp_A0A068BIF1_AT9_ACTER
FanaFAN_r2.3ch00072400 Terpenoid BAHD medium pass BAHD__00002__sp_A0A068BIF1_AT9_ACTER
FanaFAN_r2.3ch00072640 Terpenoid BAHD low borderline BAHD__00023__sp_O22975_LPAAT_ARATH
FanaFAN_r2.3ch00073660 Terpenoid BAHD medium pass BAHD__00095__sp_Q9SZ58_BRAT1_ARATH
FanaFAN_r2.3ch00075520 Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
FanaFAN_r2.3ch00079150 Terpenoid BAHD medium pass BAHD__00041__sp_Q4VCM1_LCAT2_ARATH
FanaFAN_r2.3ch00079380 Terpenoid BAHD low borderline BAHD__00026__sp_O64811_SCP9_ARATH
FanaFAN_r2.3ch00080310 Terpenoid BAHD low borderline BAHD__00066__sp_Q94CK0_WSD7_ARATH
FanaFAN_r2.3ch00080810 Terpenoid BAHD medium pass BAHD__00038__sp_Q3EC11_ZDHC2_ARATH
FanaFAN_r2.3ch00080820 Terpenoid BAHD medium pass BAHD__00038__sp_Q3EC11_ZDHC2_ARATH
FanaFAN_r2.3ch00081060 Terpenoid BAHD low borderline BAHD__00066__sp_Q94CK0_WSD7_ARATH
FanaFAN_r2.3ch00081780 Terpenoid BAHD low borderline BAHD__00012__sp_A1XWY7_CFAT_PETHY
FanaFAN_r2.3ch00083310 Terpenoid BAHD low borderline BAHD__00012__sp_A1XWY7_CFAT_PETHY
FanaFAN_r2.3ch00085950 Terpenoid BAHD medium pass BAHD__00057__sp_Q8L7R3_LPCT1_ARATH
FanaFAN_r2.3ch00086690 Terpenoid BAHD medium pass BAHD__00024__sp_O23393_BIA1_ARATH
FanaFAN_r2.3ch00086710 Terpenoid BAHD low borderline BAHD__00032__sp_P0DO84_AT_STRNX
FanaFAN_r2.3ch00088290 Terpenoid BAHD medium pass BAHD__00023__sp_O22975_LPAAT_ARATH
FanaFAN_r2.3ch00088510 Terpenoid BAHD medium pass BAHD__00002__sp_A0A068BIF1_AT9_ACTER
FanaFAN_r2.3ch00089110 Terpenoid BAHD low borderline BAHD__00082__sp_Q9LLY4_LPAT1_BRANA
FanaFAN_r2.3ch00090240 Terpenoid BAHD low borderline BAHD__00082__sp_Q9LLY4_LPAT1_BRANA
FanaFAN_r2.3ch00090740 Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
FanaFAN_r2.3ch00091460 Terpenoid BAHD low borderline BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
FanaFAN_r2.3ch00091540 Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
FanaFAN_r2.3ch00099210 Terpenoid BAHD medium pass BAHD__00024__sp_O23393_BIA1_ARATH
FanaFAN_r2.3ch00103700 Terpenoid BAHD low borderline BAHD__00026__sp_O64811_SCP9_ARATH
FanaFAN_r2.3ch00110170 Terpenoid BAHD low borderline BAHD__00009__sp_A0A4P1QUJ3_TTHAT_LUPAN
FanaFAN_r2.3ch00110180 Terpenoid BAHD medium pass BAHD__00016__sp_D4NUX0_HCT1_ACTRA
FanaFAN_r2.3ch00110190 Terpenoid BAHD medium pass BAHD__00016__sp_D4NUX0_HCT1_ACTRA
FanaFAN_r2.3ch00112670 Terpenoid BAHD medium pass BAHD__00016__sp_D4NUX0_HCT1_ACTRA
FanaFAN_r2.3ch00112680 Terpenoid BAHD medium pass BAHD__00016__sp_D4NUX0_HCT1_ACTRA
FanaFAN_r2.3ch00115270 Terpenoid BAHD medium pass BAHD__00016__sp_D4NUX0_HCT1_ACTRA
FanaFAN_r2.3ch00115280 Terpenoid BAHD medium pass BAHD__00016__sp_D4NUX0_HCT1_ACTRA
FanaFAN_r2.3ch00115470 Terpenoid BAHD low borderline BAHD__00010__sp_A0AAW1LG41_BAHD1_SAPOF
FanaFAN_r2.3ch00115480 Terpenoid BAHD medium pass BAHD__00024__sp_O23393_BIA1_ARATH
FanaFAN_r2.3ch00122990 Terpenoid BAHD medium pass BAHD__00096__sp_Q9XGY6_WAXS1_SIMCH
FanaFAN_r2.3ch00123040 Terpenoid BAHD low borderline BAHD__00025__sp_O64810_SCP10_ARATH
FanaFAN_r2.3ch00123510 Terpenoid BAHD medium pass BAHD__00032__sp_P0DO84_AT_STRNX
FanaFAN_r2.3ch00123520 Terpenoid BAHD medium pass BAHD__00032__sp_P0DO84_AT_STRNX
FanaFAN_r2.3ch00123540 Terpenoid BAHD medium pass BAHD__00024__sp_O23393_BIA1_ARATH
FanaFAN_r2.3ch00124380 Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH