PlantSME Plant secondary metabolism enzyme database

Isatis indigotica (isatis_indigotica)

Imported from atlas release summary for Isatis indigotica.

2398
Candidate Protein Records
1891
Pathway-Level Records
4449
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 546 19 BAHD (267) View species results
Alkaloid pathway 445 21 SGD (119) View species results
Phenylpropanoid pathway 406 13 POD (177) View species results
Rosmarinic acid pathway 170 7 C4H (61) View species results
Flavonoid pathway 167 11 UFGT (64) View species results
Steroid pathway 157 11 SMT1/SMT2/SMT3 (56) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1477 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 364 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
IindContig008310012360.1 Alkaloid LAMT medium borderline
IindContig008590013000.1 Alkaloid LAMT medium borderline
IindContig009550016670.1 Alkaloid LAMT low borderline
IindContig009550016670.2 Alkaloid LAMT low borderline
Iind00G0036000.1 Alkaloid MPO medium pass
Iind01G0038480.1 Alkaloid MPO low borderline
Iind01G0038490.1 Alkaloid MPO low borderline
Iind01G0038510.1 Alkaloid MPO medium pass
Iind02G0027960.1 Alkaloid MPO medium pass
Iind04G0005290.1 Alkaloid MPO high pass
Iind05G0014900.1 Alkaloid MPO medium pass
Iind05G0040810.1 Alkaloid MPO low borderline
Iind00G0004200.1 Alkaloid NCS medium borderline
Iind01G0021870.1 Alkaloid NCS medium borderline
Iind01G0030290.1 Alkaloid NCS medium borderline
Iind02G0001490.1 Alkaloid NCS medium borderline
Iind02G0031260.1 Alkaloid NCS medium borderline
Iind03G0001370.1 Alkaloid NCS medium borderline
Iind04G0013640.1 Alkaloid NCS medium borderline
Iind05G0017340.1 Alkaloid NCS medium borderline
Iind05G0017350.2 Alkaloid NCS medium borderline
Iind05G0017350.3 Alkaloid NCS medium borderline
Iind05G0021920.1 Alkaloid NCS medium borderline
Iind06G0022720.1 Alkaloid NCS medium borderline
Iind06G0022720.10 Alkaloid NCS medium borderline
Iind06G0022720.11 Alkaloid NCS medium borderline
Iind06G0022720.12 Alkaloid NCS medium borderline
Iind06G0022720.13 Alkaloid NCS medium borderline
Iind06G0022720.14 Alkaloid NCS medium borderline
Iind06G0022720.2 Alkaloid NCS medium borderline
Iind06G0022720.3 Alkaloid NCS medium borderline
Iind06G0022720.4 Alkaloid NCS medium borderline
Iind06G0022720.5 Alkaloid NCS medium borderline
Iind06G0022720.6 Alkaloid NCS medium borderline
Iind06G0022720.7 Alkaloid NCS medium borderline
Iind06G0022720.8 Alkaloid NCS medium borderline
Iind06G0022720.9 Alkaloid NCS medium borderline
Iind06G0022740.1 Alkaloid NCS medium borderline
Iind06G0022750.1 Alkaloid NCS medium borderline
Iind06G0022780.1 Alkaloid NCS medium borderline
Iind06G0022780.2 Alkaloid NCS medium borderline
Iind06G0022810.1 Alkaloid NCS medium borderline
Iind00G0008410.1 Alkaloid NMT medium pass
Iind00G0012000.1 Alkaloid NMT medium pass
Iind00G0019810.1 Alkaloid NMT medium pass
Iind00G0019820.1 Alkaloid NMT medium pass
Iind00G0019840.1 Alkaloid NMT medium pass
Iind00G0019850.1 Alkaloid NMT medium pass
Iind00G0024000.1 Alkaloid NMT low borderline
Iind00G0025030.1 Alkaloid NMT medium pass