PlantSME Plant secondary metabolism enzyme database

Isatis indigotica (isatis_indigotica)

Imported from atlas release summary for Isatis indigotica.

2398
Candidate Protein Records
1891
Pathway-Level Records
4449
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 546 19 BAHD (267) View species results
Alkaloid pathway 445 21 SGD (119) View species results
Phenylpropanoid pathway 406 13 POD (177) View species results
Rosmarinic acid pathway 170 7 C4H (61) View species results
Flavonoid pathway 167 11 UFGT (64) View species results
Steroid pathway 157 11 SMT1/SMT2/SMT3 (56) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1477 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 364 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Iind06G0039400.2 Phenylpropanoid CSE medium pass
IindContig005160004590.1 Phenylpropanoid CSE medium pass
IindContig008900014200.1 Phenylpropanoid CSE medium pass
IindContig008900014200.2 Phenylpropanoid CSE medium pass
IindContig008920014310.1 Phenylpropanoid CSE low borderline
IindContig010360019440.1 Phenylpropanoid CSE medium pass
IindContig010450019710.1 Phenylpropanoid CSE medium pass
IindContig010450019710.2 Phenylpropanoid CSE medium pass
IindContig011100022010.1 Phenylpropanoid CSE medium pass
Iind00G0008690.1 Phenylpropanoid F5H/CYP84A medium borderline
Iind01G0001130.1 Phenylpropanoid F5H/CYP84A medium borderline
Iind01G0004690.1 Phenylpropanoid F5H/CYP84A medium borderline
Iind01G0034070.1 Phenylpropanoid F5H/CYP84A medium borderline
Iind02G0011590.1 Phenylpropanoid F5H/CYP84A medium borderline
Iind02G0014730.1 Phenylpropanoid F5H/CYP84A medium borderline
Iind02G0031360.1 Phenylpropanoid F5H/CYP84A medium borderline
Iind03G0013190.2 Phenylpropanoid F5H/CYP84A medium borderline
Iind03G0019380.1 Phenylpropanoid F5H/CYP84A medium borderline
Iind03G0019400.1 Phenylpropanoid F5H/CYP84A medium borderline
Iind04G0005910.1 Phenylpropanoid F5H/CYP84A low borderline
Iind04G0005930.1 Phenylpropanoid F5H/CYP84A medium borderline
Iind04G0005950.1 Phenylpropanoid F5H/CYP84A medium pass
Iind04G0025520.1 Phenylpropanoid F5H/CYP84A low borderline
Iind05G0010240.1 Phenylpropanoid F5H/CYP84A low borderline
Iind05G0012530.1 Phenylpropanoid F5H/CYP84A medium borderline
Iind05G0037420.1 Phenylpropanoid F5H/CYP84A medium borderline
Iind06G0006960.1 Phenylpropanoid F5H/CYP84A medium borderline
Iind06G0024620.1 Phenylpropanoid F5H/CYP84A medium borderline
Iind06G0024660.1 Phenylpropanoid F5H/CYP84A medium borderline
Iind06G0037680.1 Phenylpropanoid F5H/CYP84A medium borderline
IindContig009420016200.1 Phenylpropanoid F5H/CYP84A medium borderline
Iind00G0004250.1 Phenylpropanoid HCT medium pass
Iind00G0008010.1 Phenylpropanoid HCT low borderline
Iind01G0000820.1 Phenylpropanoid HCT low borderline
Iind01G0005890.1 Phenylpropanoid HCT low borderline
Iind01G0005890.2 Phenylpropanoid HCT low borderline
Iind01G0022730.1 Phenylpropanoid HCT medium pass
Iind02G0002340.1 Phenylpropanoid HCT medium pass
Iind02G0021750.2 Phenylpropanoid HCT low borderline
Iind02G0023500.1 Phenylpropanoid HCT low borderline
Iind02G0023510.1 Phenylpropanoid HCT low borderline
Iind03G0001960.1 Phenylpropanoid HCT medium pass
Iind04G0007440.1 Phenylpropanoid HCT low borderline
Iind04G0007750.1 Phenylpropanoid HCT low borderline
Iind05G0015480.1 Phenylpropanoid HCT low borderline
Iind05G0025770.1 Phenylpropanoid HCT low borderline
Iind06G0025250.1 Phenylpropanoid HCT medium pass
Iind00G0001080.1 Phenylpropanoid LAC low borderline
Iind00G0001080.3 Phenylpropanoid LAC low borderline
Iind00G0001080.5 Phenylpropanoid LAC low borderline