PlantSME Plant secondary metabolism enzyme database

Isatis indigotica (isatis_indigotica)

Imported from atlas release summary for Isatis indigotica.

2398
Candidate Protein Records
1891
Pathway-Level Records
4449
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 546 19 BAHD (267) View species results
Alkaloid pathway 445 21 SGD (119) View species results
Phenylpropanoid pathway 406 13 POD (177) View species results
Rosmarinic acid pathway 170 7 C4H (61) View species results
Flavonoid pathway 167 11 UFGT (64) View species results
Steroid pathway 157 11 SMT1/SMT2/SMT3 (56) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1477 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 364 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Iind06G0030040.1 Rosmarinic Acid C4H low borderline
Iind06G0030210.1 Rosmarinic Acid C4H low borderline
Iind06G0030220.1 Rosmarinic Acid C4H medium pass
Iind06G0030230.1 Rosmarinic Acid C4H low borderline
Iind06G0030240.1 Rosmarinic Acid C4H medium pass
Iind06G0037680.1 Rosmarinic Acid C4H medium pass
Iind06G0037690.1 Rosmarinic Acid C4H medium pass
Iind06G0038630.1 Rosmarinic Acid C4H low borderline
IindContig000070000180.1 Rosmarinic Acid C4H low borderline
IindContig007180009450.1 Rosmarinic Acid C4H medium pass
IindContig007520010300.1 Rosmarinic Acid C4H low borderline
IindContig008370012470.1 Rosmarinic Acid C4H low borderline
IindContig009420016200.1 Rosmarinic Acid C4H low borderline
IindContig009420016210.1 Rosmarinic Acid C4H low borderline
IindContig009420016240.1 Rosmarinic Acid C4H medium pass
IindContig009420016250.1 Rosmarinic Acid C4H medium pass
IindContig009910017820.1 Rosmarinic Acid C4H low borderline
IindContig009990018180.1 Rosmarinic Acid C4H medium pass
IindContig009990018190.1 Rosmarinic Acid C4H medium pass
IindContig009990018200.1 Rosmarinic Acid C4H medium pass
IindContig009990018210.1 Rosmarinic Acid C4H medium pass
IindContig009990018220.1 Rosmarinic Acid C4H medium pass
IindContig010900021230.1 Rosmarinic Acid C4H low borderline
IindContig011130022050.1 Rosmarinic Acid C4H low borderline
Iind00G0000380.1 Rosmarinic Acid CPR low borderline
Iind00G0000380.2 Rosmarinic Acid CPR low borderline
Iind00G0000380.3 Rosmarinic Acid CPR low borderline
Iind03G0007470.1 Rosmarinic Acid CPR medium pass
Iind03G0007480.1 Rosmarinic Acid CPR low borderline
Iind03G0007530.1 Rosmarinic Acid CPR medium pass
Iind03G0036650.1 Rosmarinic Acid CPR medium pass
Iind05G0025780.1 Rosmarinic Acid CPR medium pass
Iind05G0025780.2 Rosmarinic Acid CPR medium pass
Iind05G0025800.1 Rosmarinic Acid CPR medium pass
Iind05G0025800.2 Rosmarinic Acid CPR medium pass
Iind05G0031540.1 Rosmarinic Acid CPR medium pass
Iind05G0031540.2 Rosmarinic Acid CPR medium pass
Iind05G0031540.3 Rosmarinic Acid CPR medium pass
Iind06G0028500.1 Rosmarinic Acid CPR medium pass
Iind06G0028500.2 Rosmarinic Acid CPR medium pass
Iind02G0011150.1 Rosmarinic Acid HPPR medium pass
Iind02G0011160.1 Rosmarinic Acid HPPR medium pass
Iind02G0011170.1 Rosmarinic Acid HPPR medium pass
Iind06G0000150.1 Rosmarinic Acid HPPR medium pass
Iind06G0035090.1 Rosmarinic Acid HPPR medium pass
Iind01G0003240.1 Rosmarinic Acid PAL medium pass
Iind03G0029070.1 Rosmarinic Acid PAL high pass
Iind03G0029070.2 Rosmarinic Acid PAL high pass
Iind04G0011110.1 Rosmarinic Acid PAL high pass
Iind06G0030190.1 Rosmarinic Acid PAL high pass