PlantSME Plant secondary metabolism enzyme database

Ocimum basilicum (ocimum_basilicum)

Imported from atlas release summary for Ocimum basilicum.

5408
Candidate Protein Records
4737
Pathway-Level Records
12960
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1561 19 BAHD (533) View species results
Alkaloid pathway 913 24 GES (214) View species results
Phenylpropanoid pathway 903 13 POD (251) View species results
Rosmarinic acid pathway 611 7 C4H (314) View species results
Flavonoid pathway 564 15 UFGT (391) View species results
Steroid pathway 185 12 CAS (93) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 5896 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1231 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
ocimum_basilicum_1973.g146.t1 Flavonoid UFGT high pass
ocimum_basilicum_1975.g101.t1 Flavonoid UFGT medium pass
ocimum_basilicum_1975.g102.t1 Flavonoid UFGT medium pass
ocimum_basilicum_1975.g103.t1 Flavonoid UFGT medium pass
ocimum_basilicum_1980.g75.t1 Flavonoid UFGT high pass
ocimum_basilicum_231800.g2.t1 Flavonoid UFGT medium pass
ocimum_basilicum_302806.g3.t1 Flavonoid UFGT medium pass
ocimum_basilicum_303058.g2.t1 Flavonoid UFGT medium pass
ocimum_basilicum_303128.g1.t1 Flavonoid UFGT medium pass
ocimum_basilicum_303128.g2.t1 Flavonoid UFGT medium pass
ocimum_basilicum_313904.g2.t1 Flavonoid UFGT medium pass
ocimum_basilicum_314159.g2.t1 Flavonoid UFGT medium pass
ocimum_basilicum_320734.g1.t1 Flavonoid UFGT high pass
ocimum_basilicum_343751.g1.t1 Flavonoid UFGT medium pass
ocimum_basilicum_345005.g1.t1 Flavonoid UFGT medium pass
ocimum_basilicum_347057.g1.t1 Flavonoid UFGT low borderline
ocimum_basilicum_347852.g3.t1 Flavonoid UFGT high pass
ocimum_basilicum_349.g10.t1 Flavonoid UFGT medium pass
ocimum_basilicum_349.g5.t1 Flavonoid UFGT medium pass
ocimum_basilicum_350.g10.t1 Flavonoid UFGT medium pass
ocimum_basilicum_350.g5.t1 Flavonoid UFGT medium pass
ocimum_basilicum_350317.g1.t1 Flavonoid UFGT medium pass
ocimum_basilicum_351016.g1.t1 Flavonoid UFGT medium pass
ocimum_basilicum_351016.g2.t1 Flavonoid UFGT high pass
ocimum_basilicum_355682.g1.t1 Flavonoid UFGT medium pass
ocimum_basilicum_355970.g2.t1 Flavonoid UFGT high pass
ocimum_basilicum_355970.g3.t1 Flavonoid UFGT medium pass
ocimum_basilicum_355970.g4.t1 Flavonoid UFGT medium pass
ocimum_basilicum_355976.g1.t1 Flavonoid UFGT medium pass
ocimum_basilicum_359099.g1.t1 Flavonoid UFGT medium pass
ocimum_basilicum_360077.g2.t1 Flavonoid UFGT high pass
ocimum_basilicum_360104.g1.t1 Flavonoid UFGT high pass
ocimum_basilicum_363597.g1.t1 Flavonoid UFGT high pass
ocimum_basilicum_365934.g1.t1 Flavonoid UFGT high pass
ocimum_basilicum_368709.g2.t1 Flavonoid UFGT high pass
ocimum_basilicum_370849.g2.t1 Flavonoid UFGT high pass
ocimum_basilicum_371163.g1.t1 Flavonoid UFGT medium pass
ocimum_basilicum_371177.g2.t1 Flavonoid UFGT medium pass
ocimum_basilicum_371680.g7.t1 Flavonoid UFGT medium pass
ocimum_basilicum_371768.g2.t1 Flavonoid UFGT medium pass
ocimum_basilicum_372411.g6.t1 Flavonoid UFGT high pass
ocimum_basilicum_373104.g4.t1 Flavonoid UFGT low borderline
ocimum_basilicum_374107.g2.t1 Flavonoid UFGT high pass
ocimum_basilicum_374418.g1.t1 Flavonoid UFGT medium pass
ocimum_basilicum_374874.g6.t1 Flavonoid UFGT medium pass
ocimum_basilicum_374874.g9.t1 Flavonoid UFGT medium pass
ocimum_basilicum_376609.g3.t1 Flavonoid UFGT medium pass
ocimum_basilicum_376609.g4.t1 Flavonoid UFGT high pass
ocimum_basilicum_376609.g5.t1 Flavonoid UFGT medium pass
ocimum_basilicum_377032.g13.t1 Flavonoid UFGT medium pass