PlantSME Plant secondary metabolism enzyme database

Ocimum basilicum (ocimum_basilicum)

Imported from atlas release summary for Ocimum basilicum.

5408
Candidate Protein Records
4737
Pathway-Level Records
12960
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1561 19 BAHD (533) View species results
Alkaloid pathway 913 24 GES (214) View species results
Phenylpropanoid pathway 903 13 POD (251) View species results
Rosmarinic acid pathway 611 7 C4H (314) View species results
Flavonoid pathway 564 15 UFGT (391) View species results
Steroid pathway 185 12 CAS (93) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 5896 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1231 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
ocimum_basilicum_749.g91.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_751.g137.t1 Alkaloid 7DLGT medium pass
ocimum_basilicum_755.g94.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_757.g58.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_815.g5.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_815.g6.t1 Alkaloid 7DLGT medium pass
ocimum_basilicum_823.g26.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_826.g2.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_871.g32.t1 Alkaloid 7DLGT medium pass
ocimum_basilicum_871.g36.t1 Alkaloid 7DLGT medium pass
ocimum_basilicum_871.g39.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_871.g40.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_871.g41.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_935.g51.t1 Alkaloid 7DLGT medium pass
ocimum_basilicum_1024.g14.t1 Alkaloid 7DLH low borderline
ocimum_basilicum_1024.g19.t1 Alkaloid 7DLH medium borderline
ocimum_basilicum_1081.g6.t1 Alkaloid 7DLH medium borderline
ocimum_basilicum_1701.g210.t1 Alkaloid 7DLH medium borderline
ocimum_basilicum_1701.g211.t1 Alkaloid 7DLH medium borderline
ocimum_basilicum_1824.g9.t1 Alkaloid 7DLH medium borderline
ocimum_basilicum_1958.g92.t1 Alkaloid 7DLH low borderline
ocimum_basilicum_1982.g1.t1 Alkaloid 7DLH medium borderline
ocimum_basilicum_1982.g10.t1 Alkaloid 7DLH medium borderline
ocimum_basilicum_1982.g11.t1 Alkaloid 7DLH medium borderline
ocimum_basilicum_1982.g14.t1 Alkaloid 7DLH medium borderline
ocimum_basilicum_1982.g20.t1 Alkaloid 7DLH medium borderline
ocimum_basilicum_1982.g24.t1 Alkaloid 7DLH medium borderline
ocimum_basilicum_1982.g4.t1 Alkaloid 7DLH medium borderline
ocimum_basilicum_1982.g5.t1 Alkaloid 7DLH medium borderline
ocimum_basilicum_1982.g6.t1 Alkaloid 7DLH medium borderline
ocimum_basilicum_1982.g7.t1 Alkaloid 7DLH medium borderline
ocimum_basilicum_1982.g8.t1 Alkaloid 7DLH medium borderline
ocimum_basilicum_1982.g9.t1 Alkaloid 7DLH medium borderline
ocimum_basilicum_337413.g1.t1 Alkaloid 7DLH medium borderline
ocimum_basilicum_349575.g1.t1 Alkaloid 7DLH medium borderline
ocimum_basilicum_351578.g1.t1 Alkaloid 7DLH medium borderline
ocimum_basilicum_361721.g2.t1 Alkaloid 7DLH medium borderline
ocimum_basilicum_368003.g3.t1 Alkaloid 7DLH medium borderline
ocimum_basilicum_369208.g2.t1 Alkaloid 7DLH medium borderline
ocimum_basilicum_371247.g2.t1 Alkaloid 7DLH medium borderline
ocimum_basilicum_371247.g3.t1 Alkaloid 7DLH medium borderline
ocimum_basilicum_373573.g2.t1 Alkaloid 7DLH medium borderline
ocimum_basilicum_378351.g8.t1 Alkaloid 7DLH medium borderline
ocimum_basilicum_381642.g2.t1 Alkaloid 7DLH medium borderline
ocimum_basilicum_382524.g5.t1 Alkaloid 7DLH low borderline
ocimum_basilicum_382727.g4.t1 Alkaloid 7DLH medium borderline
ocimum_basilicum_383251.g1.t1 Alkaloid 7DLH low borderline
ocimum_basilicum_383628.g2.t1 Alkaloid 7DLH medium borderline
ocimum_basilicum_383628.g3.t1 Alkaloid 7DLH medium borderline
ocimum_basilicum_384065.g16.t1 Alkaloid 7DLH low borderline