PlantSME Plant secondary metabolism enzyme database

Ocimum basilicum (ocimum_basilicum)

Imported from atlas release summary for Ocimum basilicum.

5408
Candidate Protein Records
4737
Pathway-Level Records
12960
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1561 19 BAHD (533) View species results
Alkaloid pathway 913 24 GES (214) View species results
Phenylpropanoid pathway 903 13 POD (251) View species results
Rosmarinic acid pathway 611 7 C4H (314) View species results
Flavonoid pathway 564 15 UFGT (391) View species results
Steroid pathway 185 12 CAS (93) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 5896 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1231 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
ocimum_basilicum_771.g26.t1 Rosmarinic Acid C4H low borderline
ocimum_basilicum_789.g31.t1 Rosmarinic Acid C4H low borderline
ocimum_basilicum_789.g9.t1 Rosmarinic Acid C4H low borderline
ocimum_basilicum_799.g1.t1 Rosmarinic Acid C4H low borderline
ocimum_basilicum_844.g1.t1 Rosmarinic Acid C4H low borderline
ocimum_basilicum_865.g13.t1 Rosmarinic Acid C4H low borderline
ocimum_basilicum_899.g111.t1 Rosmarinic Acid C4H low borderline
ocimum_basilicum_923.g12.t1 Rosmarinic Acid C4H low borderline
ocimum_basilicum_923.g6.t1 Rosmarinic Acid C4H low borderline
ocimum_basilicum_935.g186.t1 Rosmarinic Acid C4H low borderline
ocimum_basilicum_935.g187.t1 Rosmarinic Acid C4H medium pass
ocimum_basilicum_935.g189.t1 Rosmarinic Acid C4H medium pass
ocimum_basilicum_935.g190.t1 Rosmarinic Acid C4H medium pass
ocimum_basilicum_957.g13.t1 Rosmarinic Acid C4H medium pass
ocimum_basilicum_957.g15.t1 Rosmarinic Acid C4H medium pass
ocimum_basilicum_1125.g23.t1 Rosmarinic Acid CPR medium pass
ocimum_basilicum_1158.g3.t1 Rosmarinic Acid CPR medium pass
ocimum_basilicum_1545.g2.t1 Rosmarinic Acid CPR medium pass
ocimum_basilicum_369104.g3.t1 Rosmarinic Acid CPR medium pass
ocimum_basilicum_370848.g3.t1 Rosmarinic Acid CPR medium pass
ocimum_basilicum_373320.g1.t1 Rosmarinic Acid CPR low borderline
ocimum_basilicum_380370.g8.t1 Rosmarinic Acid CPR low borderline
ocimum_basilicum_380517.g40.t1 Rosmarinic Acid CPR medium pass
ocimum_basilicum_381783.g2.t1 Rosmarinic Acid CPR medium pass
ocimum_basilicum_382592.g2.t1 Rosmarinic Acid CPR medium pass
ocimum_basilicum_383105.g43.t1 Rosmarinic Acid CPR medium pass
ocimum_basilicum_383238.g16.t1 Rosmarinic Acid CPR medium pass
ocimum_basilicum_384260.g50.t1 Rosmarinic Acid CPR medium pass
ocimum_basilicum_384260.g61.t1 Rosmarinic Acid CPR medium pass
ocimum_basilicum_384807.g14.t1 Rosmarinic Acid CPR medium pass
ocimum_basilicum_384900.g18.t1 Rosmarinic Acid CPR low borderline
ocimum_basilicum_385000.g8.t1 Rosmarinic Acid CPR medium pass
ocimum_basilicum_385149.g75.t1 Rosmarinic Acid CPR low borderline
ocimum_basilicum_447.g30.t1 Rosmarinic Acid CPR low borderline
ocimum_basilicum_448.g147.t1 Rosmarinic Acid CPR medium pass
ocimum_basilicum_485.g19.t1 Rosmarinic Acid CPR medium pass
ocimum_basilicum_562.g38.t1 Rosmarinic Acid CPR medium pass
ocimum_basilicum_971.g9.t1 Rosmarinic Acid CPR low borderline
ocimum_basilicum_1804.g13.t1 Rosmarinic Acid HPPR medium pass
ocimum_basilicum_1804.g14.t1 Rosmarinic Acid HPPR medium pass
ocimum_basilicum_1804.g18.t1 Rosmarinic Acid HPPR medium pass
ocimum_basilicum_1974.g64.t1 Rosmarinic Acid HPPR medium pass
ocimum_basilicum_303005.g1.t1 Rosmarinic Acid HPPR low borderline
ocimum_basilicum_354712.g3.t1 Rosmarinic Acid HPPR low borderline
ocimum_basilicum_355791.g1.t1 Rosmarinic Acid HPPR medium pass
ocimum_basilicum_379955.g1.t1 Rosmarinic Acid HPPR medium pass
ocimum_basilicum_381302.g19.t1 Rosmarinic Acid HPPR medium pass
ocimum_basilicum_382145.g4.t1 Rosmarinic Acid HPPR medium pass
ocimum_basilicum_383264.g5.t1 Rosmarinic Acid HPPR medium pass
ocimum_basilicum_383421.g4.t1 Rosmarinic Acid HPPR medium pass