PlantSME Plant secondary metabolism enzyme database

Ocimum basilicum (ocimum_basilicum)

Imported from atlas release summary for Ocimum basilicum.

5408
Candidate Protein Records
4737
Pathway-Level Records
12960
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1561 19 BAHD (533) View species results
Alkaloid pathway 913 24 GES (214) View species results
Phenylpropanoid pathway 903 13 POD (251) View species results
Rosmarinic acid pathway 611 7 C4H (314) View species results
Flavonoid pathway 564 15 UFGT (391) View species results
Steroid pathway 185 12 CAS (93) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 5896 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1231 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
ocimum_basilicum_383685.g66.t1 Rosmarinic Acid RAS medium pass
ocimum_basilicum_383685.g69.t1 Rosmarinic Acid RAS medium pass
ocimum_basilicum_383685.g73.t1 Rosmarinic Acid RAS medium pass
ocimum_basilicum_383957.g146.t1 Rosmarinic Acid RAS low borderline
ocimum_basilicum_383957.g46.t1 Rosmarinic Acid RAS low borderline
ocimum_basilicum_383976.g32.t1 Rosmarinic Acid RAS medium pass
ocimum_basilicum_383976.g36.t1 Rosmarinic Acid RAS medium pass
ocimum_basilicum_384222.g76.t1 Rosmarinic Acid RAS low borderline
ocimum_basilicum_384250.g138.t1 Rosmarinic Acid RAS low borderline
ocimum_basilicum_384278.g5.t1 Rosmarinic Acid RAS low borderline
ocimum_basilicum_384313.g106.t1 Rosmarinic Acid RAS medium pass
ocimum_basilicum_384400.g49.t1 Rosmarinic Acid RAS low borderline
ocimum_basilicum_384444.g15.t1 Rosmarinic Acid RAS low borderline
ocimum_basilicum_384473.g20.t1 Rosmarinic Acid RAS low borderline
ocimum_basilicum_384785.g7.t1 Rosmarinic Acid RAS low borderline
ocimum_basilicum_384900.g49.t1 Rosmarinic Acid RAS medium pass
ocimum_basilicum_384969.g43.t1 Rosmarinic Acid RAS low borderline
ocimum_basilicum_384984.g17.t1 Rosmarinic Acid RAS low borderline
ocimum_basilicum_385022.g56.t1 Rosmarinic Acid RAS medium pass
ocimum_basilicum_385022.g59.t1 Rosmarinic Acid RAS medium pass
ocimum_basilicum_385056.g12.t1 Rosmarinic Acid RAS medium pass
ocimum_basilicum_385066.g13.t1 Rosmarinic Acid RAS low borderline
ocimum_basilicum_385346.g21.t1 Rosmarinic Acid RAS low borderline
ocimum_basilicum_385620.g16.t1 Rosmarinic Acid RAS low borderline
ocimum_basilicum_385708.g77.t1 Rosmarinic Acid RAS low borderline
ocimum_basilicum_425046.g1.t1 Rosmarinic Acid RAS low borderline
ocimum_basilicum_425046.g2.t1 Rosmarinic Acid RAS medium pass
ocimum_basilicum_425047.g1.t1 Rosmarinic Acid RAS low borderline
ocimum_basilicum_425047.g2.t1 Rosmarinic Acid RAS medium pass
ocimum_basilicum_425048.g1.t1 Rosmarinic Acid RAS medium pass
ocimum_basilicum_425048.g2.t1 Rosmarinic Acid RAS medium pass
ocimum_basilicum_425049.g1.t1 Rosmarinic Acid RAS medium pass
ocimum_basilicum_425049.g2.t1 Rosmarinic Acid RAS medium pass
ocimum_basilicum_505464.g3.t1 Rosmarinic Acid RAS low borderline
ocimum_basilicum_539.g32.t1 Rosmarinic Acid RAS medium pass
ocimum_basilicum_539.g33.t1 Rosmarinic Acid RAS medium pass
ocimum_basilicum_539.g38.t1 Rosmarinic Acid RAS low borderline
ocimum_basilicum_539.g42.t1 Rosmarinic Acid RAS low borderline
ocimum_basilicum_539.g51.t1 Rosmarinic Acid RAS low borderline
ocimum_basilicum_539.g52.t1 Rosmarinic Acid RAS low borderline
ocimum_basilicum_539.g57.t1 Rosmarinic Acid RAS low borderline
ocimum_basilicum_539.g58.t1 Rosmarinic Acid RAS medium pass
ocimum_basilicum_543.g31.t1 Rosmarinic Acid RAS low borderline
ocimum_basilicum_544734.g6.t1 Rosmarinic Acid RAS low borderline
ocimum_basilicum_544735.g6.t1 Rosmarinic Acid RAS low borderline
ocimum_basilicum_546.g111.t1 Rosmarinic Acid RAS low borderline
ocimum_basilicum_547.g370.t1 Rosmarinic Acid RAS medium pass
ocimum_basilicum_548438.g2.t1 Rosmarinic Acid RAS low borderline
ocimum_basilicum_548439.g2.t1 Rosmarinic Acid RAS low borderline
ocimum_basilicum_549.g136.t1 Rosmarinic Acid RAS medium pass