PlantSME Plant secondary metabolism enzyme database

Ocimum basilicum (ocimum_basilicum)

Imported from atlas release summary for Ocimum basilicum.

4737
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1561 19 BAHD (533) View species results
Alkaloid pathway 913 24 GES (214) View species results
Phenylpropanoid pathway 903 13 POD (251) View species results
Rosmarinic acid pathway 611 7 C4H (314) View species results
Flavonoid pathway 564 15 UFGT (391) View species results
Steroid pathway 185 12 CAS (93) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 5896 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1231 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
ocimum_basilicum_1972.g146.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_1973.g146.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_1975.g101.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_1975.g102.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_1975.g103.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_1980.g75.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_231800.g2.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_302806.g3.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_303058.g2.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_303128.g1.t1 Alkaloid 7DLGT medium pass
ocimum_basilicum_303128.g2.t1 Alkaloid 7DLGT high pass
ocimum_basilicum_313904.g2.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_314159.g2.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_320734.g1.t1 Alkaloid 7DLGT medium pass
ocimum_basilicum_343751.g1.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_345005.g1.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_347852.g3.t1 Alkaloid 7DLGT medium pass
ocimum_basilicum_349.g10.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_349.g5.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_350.g10.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_350.g5.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_350317.g1.t1 Alkaloid 7DLGT medium pass
ocimum_basilicum_351016.g1.t1 Alkaloid 7DLGT high pass
ocimum_basilicum_351016.g2.t1 Alkaloid 7DLGT medium pass
ocimum_basilicum_355682.g1.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_355970.g2.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_355970.g3.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_355970.g4.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_355976.g1.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_359099.g1.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_360077.g2.t1 Alkaloid 7DLGT high pass
ocimum_basilicum_360104.g1.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_363597.g1.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_365934.g1.t1 Alkaloid 7DLGT high pass
ocimum_basilicum_368709.g2.t1 Alkaloid 7DLGT medium pass
ocimum_basilicum_370849.g2.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_371163.g1.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_371177.g2.t1 Alkaloid 7DLGT high pass
ocimum_basilicum_371680.g7.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_371768.g2.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_372411.g6.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_373104.g4.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_374107.g2.t1 Alkaloid 7DLGT medium pass
ocimum_basilicum_374418.g1.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_374874.g6.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_374874.g8.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_374874.g9.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_376609.g3.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_376609.g4.t1 Alkaloid 7DLGT medium pass
ocimum_basilicum_376609.g5.t1 Alkaloid 7DLGT low borderline