PlantSME Plant secondary metabolism enzyme database

Ocimum basilicum (ocimum_basilicum)

Imported from atlas release summary for Ocimum basilicum.

5408
Candidate Protein Records
4737
Pathway-Level Records
12960
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1561 19 BAHD (533) View species results
Alkaloid pathway 913 24 GES (214) View species results
Phenylpropanoid pathway 903 13 POD (251) View species results
Rosmarinic acid pathway 611 7 C4H (314) View species results
Flavonoid pathway 564 15 UFGT (391) View species results
Steroid pathway 185 12 CAS (93) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 5896 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1231 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
ocimum_basilicum_544.g115.t1 Alkaloid T16H medium borderline
ocimum_basilicum_544961.g3.t1 Alkaloid T16H medium borderline
ocimum_basilicum_544961.g5.t1 Alkaloid T16H medium borderline
ocimum_basilicum_544961.g6.t1 Alkaloid T16H medium borderline
ocimum_basilicum_544961.g7.t1 Alkaloid T16H medium borderline
ocimum_basilicum_544962.g3.t1 Alkaloid T16H medium borderline
ocimum_basilicum_544962.g5.t1 Alkaloid T16H medium borderline
ocimum_basilicum_544962.g6.t1 Alkaloid T16H medium borderline
ocimum_basilicum_544962.g7.t1 Alkaloid T16H medium borderline
ocimum_basilicum_547.g173.t1 Alkaloid T16H medium borderline
ocimum_basilicum_547.g30.t1 Alkaloid T16H medium borderline
ocimum_basilicum_549.g210.t1 Alkaloid T16H medium borderline
ocimum_basilicum_656.g57.t1 Alkaloid T16H low borderline
ocimum_basilicum_662.g15.t1 Alkaloid T16H low borderline
ocimum_basilicum_671.g52.t1 Alkaloid T16H medium borderline
ocimum_basilicum_704.g24.t1 Alkaloid T16H low borderline
ocimum_basilicum_710.g82.t1 Alkaloid T16H medium borderline
ocimum_basilicum_714.g60.t1 Alkaloid T16H medium borderline
ocimum_basilicum_716.g34.t1 Alkaloid T16H medium borderline
ocimum_basilicum_716.g54.t1 Alkaloid T16H medium borderline
ocimum_basilicum_724.g43.t1 Alkaloid T16H medium borderline
ocimum_basilicum_746.g12.t1 Alkaloid T16H medium borderline
ocimum_basilicum_746.g13.t1 Alkaloid T16H medium borderline
ocimum_basilicum_746.g15.t1 Alkaloid T16H medium borderline
ocimum_basilicum_746.g29.t1 Alkaloid T16H medium borderline
ocimum_basilicum_749.g28.t1 Alkaloid T16H medium borderline
ocimum_basilicum_749.g31.t1 Alkaloid T16H medium borderline
ocimum_basilicum_749.g46.t1 Alkaloid T16H low borderline
ocimum_basilicum_755.g46.t1 Alkaloid T16H medium borderline
ocimum_basilicum_957.g14.t1 Alkaloid T16H medium borderline
ocimum_basilicum_1032.g39.t1 Alkaloid T3O medium borderline
ocimum_basilicum_1083.g1.t1 Alkaloid T3O medium borderline
ocimum_basilicum_1083.g4.t1 Alkaloid T3O low borderline
ocimum_basilicum_1083.g5.t1 Alkaloid T3O low borderline
ocimum_basilicum_1168.g3.t1 Alkaloid T3O medium borderline
ocimum_basilicum_1168.g5.t1 Alkaloid T3O medium borderline
ocimum_basilicum_1179.g15.t1 Alkaloid T3O medium borderline
ocimum_basilicum_1209.g9.t1 Alkaloid T3O medium borderline
ocimum_basilicum_1248.g17.t1 Alkaloid T3O medium pass
ocimum_basilicum_1276.g37.t1 Alkaloid T3O medium borderline
ocimum_basilicum_1344.g10.t1 Alkaloid T3O medium borderline
ocimum_basilicum_1344.g11.t1 Alkaloid T3O medium borderline
ocimum_basilicum_1356.g2.t1 Alkaloid T3O medium borderline
ocimum_basilicum_1356.g3.t1 Alkaloid T3O medium borderline
ocimum_basilicum_1370.g9.t1 Alkaloid T3O low borderline
ocimum_basilicum_1385.g14.t1 Alkaloid T3O medium pass
ocimum_basilicum_1521.g1.t1 Alkaloid T3O medium borderline
ocimum_basilicum_1521.g12.t1 Alkaloid T3O medium borderline
ocimum_basilicum_1521.g17.t1 Alkaloid T3O medium borderline
ocimum_basilicum_1521.g20.t1 Alkaloid T3O medium borderline