PlantSME Plant secondary metabolism enzyme database

Ocimum basilicum (ocimum_basilicum)

Imported from atlas release summary for Ocimum basilicum.

4737
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1561 19 BAHD (533) View species results
Alkaloid pathway 913 24 GES (214) View species results
Phenylpropanoid pathway 903 13 POD (251) View species results
Rosmarinic acid pathway 611 7 C4H (314) View species results
Flavonoid pathway 564 15 UFGT (391) View species results
Steroid pathway 185 12 CAS (93) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 5896 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1231 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
ocimum_basilicum_381385.g2.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_381408.g2.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_381651.g2.t1 Alkaloid 7DLGT medium pass
ocimum_basilicum_381651.g3.t1 Alkaloid 7DLGT medium pass
ocimum_basilicum_381692.g29.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_381692.g35.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_381692.g40.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_381692.g45.t1 Alkaloid 7DLGT high pass
ocimum_basilicum_381720.g34.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_381720.g39.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_381732.g11.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_381732.g13.t1 Alkaloid 7DLGT medium pass
ocimum_basilicum_381831.g17.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_381831.g18.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_381932.g1.t1 Alkaloid 7DLGT high pass
ocimum_basilicum_382093.g20.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_382110.g3.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_382110.g5.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_382115.g25.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_382115.g29.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_382166.g9.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_382181.g41.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_382181.g82.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_382215.g1.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_382215.g3.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_382217.g16.t1 Alkaloid 7DLGT medium pass
ocimum_basilicum_382217.g40.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_382481.g9.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_382496.g31.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_382614.g50.t1 Alkaloid 7DLGT medium pass
ocimum_basilicum_382644.g29.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_382644.g30.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_382655.g28.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_382655.g29.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_382655.g30.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_382655.g32.t1 Alkaloid 7DLGT medium pass
ocimum_basilicum_382655.g43.t1 Alkaloid 7DLGT medium pass
ocimum_basilicum_382655.g45.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_382734.g25.t1 Alkaloid 7DLGT medium pass
ocimum_basilicum_382753.g14.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_382753.g15.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_382779.g1.t1 Alkaloid 7DLGT medium pass
ocimum_basilicum_382779.g48.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_382790.g104.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_382790.g31.t1 Alkaloid 7DLGT high pass
ocimum_basilicum_382863.g2.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_382946.g20.t1 Alkaloid 7DLGT low borderline
ocimum_basilicum_383013.g8.t1 Alkaloid 7DLGT medium pass
ocimum_basilicum_383081.g39.t1 Alkaloid 7DLGT high pass
ocimum_basilicum_383121.g15.t1 Alkaloid 7DLGT medium pass