PlantSME Plant secondary metabolism enzyme database

Ocimum basilicum (ocimum_basilicum)

Imported from atlas release summary for Ocimum basilicum.

5408
Candidate Protein Records
4737
Pathway-Level Records
12960
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1561 19 BAHD (533) View species results
Alkaloid pathway 913 24 GES (214) View species results
Phenylpropanoid pathway 903 13 POD (251) View species results
Rosmarinic acid pathway 611 7 C4H (314) View species results
Flavonoid pathway 564 15 UFGT (391) View species results
Steroid pathway 185 12 CAS (93) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 5896 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1231 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
ocimum_basilicum_550.g74.t1 Flavonoid 4CL medium pass
ocimum_basilicum_550.g75.t1 Flavonoid 4CL medium pass
ocimum_basilicum_550.g91.t1 Flavonoid 4CL medium pass
ocimum_basilicum_551.g95.t1 Flavonoid 4CL low borderline
ocimum_basilicum_568.g84.t1 Flavonoid 4CL low borderline
ocimum_basilicum_570249.g1.t1 Flavonoid 4CL medium pass
ocimum_basilicum_570251.g1.t1 Flavonoid 4CL medium pass
ocimum_basilicum_652.g42.t1 Flavonoid 4CL low borderline
ocimum_basilicum_683.g57.t1 Flavonoid 4CL low borderline
ocimum_basilicum_693.g42.t1 Flavonoid 4CL low borderline
ocimum_basilicum_696.g26.t1 Flavonoid 4CL low borderline
ocimum_basilicum_696.g60.t1 Flavonoid 4CL medium pass
ocimum_basilicum_710.g70.t1 Flavonoid 4CL medium pass
ocimum_basilicum_717.g50.t1 Flavonoid 4CL medium pass
ocimum_basilicum_733.g75.t1 Flavonoid 4CL medium pass
ocimum_basilicum_733.g77.t1 Flavonoid 4CL medium pass
ocimum_basilicum_757.g114.t1 Flavonoid 4CL medium pass
ocimum_basilicum_816.g3.t1 Flavonoid 4CL medium pass
ocimum_basilicum_897.g46.t1 Flavonoid 4CL low borderline
ocimum_basilicum_973.g55.t1 Flavonoid 4CL medium pass
ocimum_basilicum_1116.g2.t1 Flavonoid ANR low borderline
ocimum_basilicum_1355.g2.t1 Flavonoid ANR medium borderline
ocimum_basilicum_1518.g11.t1 Flavonoid ANR medium borderline
ocimum_basilicum_1555.g4.t1 Flavonoid ANR medium borderline
ocimum_basilicum_1721.g23.t1 Flavonoid ANR low borderline
ocimum_basilicum_1722.g6.t1 Flavonoid ANR medium borderline
ocimum_basilicum_1845.g63.t1 Flavonoid ANR medium borderline
ocimum_basilicum_1884.g57.t1 Flavonoid ANR low borderline
ocimum_basilicum_1886.g76.t1 Flavonoid ANR medium borderline
ocimum_basilicum_1886.g77.t1 Flavonoid ANR medium borderline
ocimum_basilicum_1886.g84.t1 Flavonoid ANR medium borderline
ocimum_basilicum_1886.g86.t1 Flavonoid ANR medium borderline
ocimum_basilicum_1934.g84.t1 Flavonoid ANR medium borderline
ocimum_basilicum_1961.g63.t1 Flavonoid ANR medium borderline
ocimum_basilicum_1967.g65.t1 Flavonoid ANR medium borderline
ocimum_basilicum_1967.g77.t1 Flavonoid ANR low borderline
ocimum_basilicum_1972.g131.t1 Flavonoid ANR medium borderline
ocimum_basilicum_1972.g132.t1 Flavonoid ANR medium borderline
ocimum_basilicum_1972.g133.t1 Flavonoid ANR medium borderline
ocimum_basilicum_1972.g27.t1 Flavonoid ANR medium borderline
ocimum_basilicum_324166.g1.t1 Flavonoid ANR medium borderline
ocimum_basilicum_353357.g1.t1 Flavonoid ANR medium borderline
ocimum_basilicum_359235.g2.t1 Flavonoid ANR medium borderline
ocimum_basilicum_359235.g3.t1 Flavonoid ANR medium borderline
ocimum_basilicum_359235.g4.t1 Flavonoid ANR medium borderline
ocimum_basilicum_359235.g5.t1 Flavonoid ANR medium borderline
ocimum_basilicum_361577.g3.t1 Flavonoid ANR medium borderline
ocimum_basilicum_361577.g4.t1 Flavonoid ANR medium borderline
ocimum_basilicum_361577.g5.t1 Flavonoid ANR medium borderline
ocimum_basilicum_361577.g7.t1 Flavonoid ANR medium borderline