PlantSME Plant secondary metabolism enzyme database

Oryza coarctata (oryza_coarctata)

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Imported from atlas release summary for Oryza coarctata.

1287
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 347 20 BAHD (149) View species results
Phenylpropanoid pathway 344 12 POD (178) View species results
Alkaloid pathway 254 19 NMT (49) View species results
Flavonoid pathway 150 14 UFGT (67) View species results
Rosmarinic acid pathway 110 7 C4H (40) View species results
Steroid pathway 82 10 CAS (35) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1166 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 261 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 7DLGT
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Gene Pathway Family Confidence Status
oryza_coarctata_PC_26216 Alkaloid 7DLGT medium pass
oryza_coarctata_PC_26972 Alkaloid 7DLGT low borderline
oryza_coarctata_PC_26974 Alkaloid 7DLGT medium pass
oryza_coarctata_PC_26976 Alkaloid 7DLGT low borderline
oryza_coarctata_PC_26978 Alkaloid 7DLGT low borderline
oryza_coarctata_PC_27204 Alkaloid 7DLGT medium pass
oryza_coarctata_PC_27220 Alkaloid 7DLGT medium pass
oryza_coarctata_PC_27637 Alkaloid 7DLGT medium pass
oryza_coarctata_PC_27640 Alkaloid 7DLGT low borderline
oryza_coarctata_PC_29895 Alkaloid 7DLGT medium pass
oryza_coarctata_PC_29896 Alkaloid 7DLGT low borderline
oryza_coarctata_PC_31803 Alkaloid 7DLGT low borderline
oryza_coarctata_PC_31805 Alkaloid 7DLGT low borderline
oryza_coarctata_PC_31806 Alkaloid 7DLGT low borderline
oryza_coarctata_PC_31808 Alkaloid 7DLGT low borderline
oryza_coarctata_PC_33199 Alkaloid 7DLGT medium pass
oryza_coarctata_PC_33335 Alkaloid 7DLGT low borderline
oryza_coarctata_PC_34022 Alkaloid 7DLGT medium pass
oryza_coarctata_PC_35097 Alkaloid 7DLGT medium pass
oryza_coarctata_PC_37302 Alkaloid 7DLGT low borderline
oryza_coarctata_PC_37768 Alkaloid 7DLGT low borderline
oryza_coarctata_PC_37796 Alkaloid 7DLGT low borderline
oryza_coarctata_PC_38938 Alkaloid 7DLGT low borderline
oryza_coarctata_PC_39324 Alkaloid 7DLGT low borderline
oryza_coarctata_PC_39582 Alkaloid 7DLGT medium pass
oryza_coarctata_PC_42251 Alkaloid 7DLGT medium pass
oryza_coarctata_PC_42478 Alkaloid 7DLGT low borderline
oryza_coarctata_PC_42482 Alkaloid 7DLGT low borderline
oryza_coarctata_PC_42490 Alkaloid 7DLGT low borderline
oryza_coarctata_PC_42916 Alkaloid 7DLGT low borderline
oryza_coarctata_PC_43231 Alkaloid 7DLGT medium pass
oryza_coarctata_PC_43293 Alkaloid 7DLGT medium pass
oryza_coarctata_PC_43842 Alkaloid 7DLGT medium pass
oryza_coarctata_PC_43927 Alkaloid 7DLGT low borderline
oryza_coarctata_PC_46868 Alkaloid 7DLGT high pass
oryza_coarctata_PC_47877 Alkaloid 7DLGT medium pass
oryza_coarctata_PC_48046 Alkaloid 7DLGT high pass
oryza_coarctata_PC_48234 Alkaloid 7DLGT medium pass
oryza_coarctata_PC_50177 Alkaloid 7DLGT low borderline