PlantSME Plant secondary metabolism enzyme database

Oryza coarctata (oryza_coarctata)

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Imported from atlas release summary for Oryza coarctata.

1287
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 347 20 BAHD (149) View species results
Phenylpropanoid pathway 344 12 POD (178) View species results
Alkaloid pathway 254 19 NMT (49) View species results
Flavonoid pathway 150 14 UFGT (67) View species results
Rosmarinic acid pathway 110 7 C4H (40) View species results
Steroid pathway 82 10 CAS (35) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1166 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 261 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
oryza_coarctata_PC_00842 Rosmarinic Acid 4CL low borderline
oryza_coarctata_PC_01018 Rosmarinic Acid 4CL low borderline
oryza_coarctata_PC_07756 Rosmarinic Acid 4CL low borderline
oryza_coarctata_PC_09027 Rosmarinic Acid 4CL medium pass
oryza_coarctata_PC_09853 Rosmarinic Acid 4CL medium pass
oryza_coarctata_PC_11127 Rosmarinic Acid 4CL low borderline
oryza_coarctata_PC_11310 Rosmarinic Acid 4CL low borderline
oryza_coarctata_PC_11429 Rosmarinic Acid 4CL medium pass
oryza_coarctata_PC_13113 Rosmarinic Acid 4CL low borderline
oryza_coarctata_PC_14714 Rosmarinic Acid 4CL low borderline
oryza_coarctata_PC_14875 Rosmarinic Acid 4CL low borderline
oryza_coarctata_PC_14911 Rosmarinic Acid 4CL medium pass
oryza_coarctata_PC_16411 Rosmarinic Acid 4CL low borderline
oryza_coarctata_PC_17556 Rosmarinic Acid 4CL medium pass
oryza_coarctata_PC_19033 Rosmarinic Acid 4CL low borderline
oryza_coarctata_PC_21161 Rosmarinic Acid 4CL low borderline
oryza_coarctata_PC_22599 Rosmarinic Acid 4CL medium pass
oryza_coarctata_PC_22601 Rosmarinic Acid 4CL medium pass
oryza_coarctata_PC_23342 Rosmarinic Acid 4CL medium pass
oryza_coarctata_PC_23820 Rosmarinic Acid 4CL medium pass
oryza_coarctata_PC_24000 Rosmarinic Acid 4CL medium pass
oryza_coarctata_PC_24420 Rosmarinic Acid 4CL medium pass
oryza_coarctata_PC_25504 Rosmarinic Acid 4CL low borderline
oryza_coarctata_PC_27248 Rosmarinic Acid 4CL medium pass
oryza_coarctata_PC_28512 Rosmarinic Acid 4CL medium pass
oryza_coarctata_PC_29678 Rosmarinic Acid 4CL medium pass
oryza_coarctata_PC_32983 Rosmarinic Acid 4CL low borderline
oryza_coarctata_PC_33112 Rosmarinic Acid 4CL medium pass
oryza_coarctata_PC_34416 Rosmarinic Acid 4CL low borderline
oryza_coarctata_PC_35610 Rosmarinic Acid 4CL low borderline
oryza_coarctata_PC_36320 Rosmarinic Acid 4CL low borderline
oryza_coarctata_PC_37565 Rosmarinic Acid 4CL low borderline
oryza_coarctata_PC_37727 Rosmarinic Acid 4CL medium pass
oryza_coarctata_PC_37900 Rosmarinic Acid 4CL low borderline
oryza_coarctata_PC_38431 Rosmarinic Acid 4CL medium pass
oryza_coarctata_PC_39223 Rosmarinic Acid 4CL low borderline
oryza_coarctata_PC_39264 Rosmarinic Acid 4CL medium pass
oryza_coarctata_PC_41273 Rosmarinic Acid 4CL low borderline
oryza_coarctata_PC_41346 Rosmarinic Acid 4CL medium pass
oryza_coarctata_PC_43064 Rosmarinic Acid 4CL medium pass
oryza_coarctata_PC_43281 Rosmarinic Acid 4CL medium pass
oryza_coarctata_PC_44463 Rosmarinic Acid 4CL medium pass
oryza_coarctata_PC_45068 Rosmarinic Acid 4CL low borderline
oryza_coarctata_PC_45114 Rosmarinic Acid 4CL medium pass
oryza_coarctata_PC_45555 Rosmarinic Acid 4CL medium pass
oryza_coarctata_PC_45949 Rosmarinic Acid 4CL medium pass
oryza_coarctata_PC_46236 Rosmarinic Acid 4CL medium pass
oryza_coarctata_PC_47655 Rosmarinic Acid 4CL medium pass
oryza_coarctata_PC_48139 Rosmarinic Acid 4CL medium pass
oryza_coarctata_PC_48140 Rosmarinic Acid 4CL medium pass