PlantSME Plant secondary metabolism enzyme database

Oryza coarctata (oryza_coarctata)

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Imported from atlas release summary for Oryza coarctata.

1287
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 347 20 BAHD (149) View species results
Phenylpropanoid pathway 344 12 POD (178) View species results
Alkaloid pathway 254 19 NMT (49) View species results
Flavonoid pathway 150 14 UFGT (67) View species results
Rosmarinic acid pathway 110 7 C4H (40) View species results
Steroid pathway 82 10 CAS (35) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1166 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 261 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: SLS
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Gene Pathway Family Confidence Status Best Target
oryza_coarctata_PC_00492 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
oryza_coarctata_PC_06892 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
oryza_coarctata_PC_07627 Alkaloid SLS medium borderline SLS__00002__sp_U5NDT8_SLS2_CATRO
oryza_coarctata_PC_08898 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
oryza_coarctata_PC_11558 Alkaloid SLS medium borderline SLS__00002__sp_U5NDT8_SLS2_CATRO
oryza_coarctata_PC_12467 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
oryza_coarctata_PC_12468 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
oryza_coarctata_PC_12471 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
oryza_coarctata_PC_13270 Alkaloid SLS medium borderline SLS__00002__sp_U5NDT8_SLS2_CATRO
oryza_coarctata_PC_13468 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
oryza_coarctata_PC_14900 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
oryza_coarctata_PC_18026 Alkaloid SLS medium borderline SLS__00002__sp_U5NDT8_SLS2_CATRO
oryza_coarctata_PC_20837 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
oryza_coarctata_PC_22984 Alkaloid SLS medium pass SLS__00002__sp_U5NDT8_SLS2_CATRO
oryza_coarctata_PC_24889 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
oryza_coarctata_PC_31429 Alkaloid SLS medium pass SLS__00001__sp_Q05047_SLS1_CATRO
oryza_coarctata_PC_32995 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
oryza_coarctata_PC_36669 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
oryza_coarctata_PC_37839 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
oryza_coarctata_PC_38186 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
oryza_coarctata_PC_38778 Alkaloid SLS medium borderline SLS__00002__sp_U5NDT8_SLS2_CATRO
oryza_coarctata_PC_39913 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
oryza_coarctata_PC_40112 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
oryza_coarctata_PC_42745 Alkaloid SLS medium borderline SLS__00002__sp_U5NDT8_SLS2_CATRO
oryza_coarctata_PC_44005 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
oryza_coarctata_PC_46651 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
oryza_coarctata_PC_48620 Alkaloid SLS medium borderline SLS__00002__sp_U5NDT8_SLS2_CATRO
oryza_coarctata_PC_49227 Alkaloid SLS medium borderline SLS__00002__sp_U5NDT8_SLS2_CATRO