PlantSME Plant secondary metabolism enzyme database

Oryza coarctata (oryza_coarctata)

/

Imported from atlas release summary for Oryza coarctata.

1287
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 347 20 BAHD (149) View species results
Phenylpropanoid pathway 344 12 POD (178) View species results
Alkaloid pathway 254 19 NMT (49) View species results
Flavonoid pathway 150 14 UFGT (67) View species results
Rosmarinic acid pathway 110 7 C4H (40) View species results
Steroid pathway 82 10 CAS (35) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1166 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 261 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
Reset
Gene Pathway Family Confidence Status
oryza_coarctata_PC_02238 Flavonoid F3H low borderline
oryza_coarctata_PC_04250 Flavonoid F3H medium borderline
oryza_coarctata_PC_05426 Flavonoid F3H medium borderline
oryza_coarctata_PC_05431 Flavonoid F3H medium borderline
oryza_coarctata_PC_05551 Flavonoid F3H medium borderline
oryza_coarctata_PC_06564 Flavonoid F3H medium borderline
oryza_coarctata_PC_06960 Flavonoid F3H medium borderline
oryza_coarctata_PC_08246 Flavonoid F3H medium borderline
oryza_coarctata_PC_08647 Flavonoid F3H medium borderline
oryza_coarctata_PC_09453 Flavonoid F3H low borderline
oryza_coarctata_PC_09539 Flavonoid F3H medium borderline
oryza_coarctata_PC_09540 Flavonoid F3H medium pass
oryza_coarctata_PC_09910 Flavonoid F3H low borderline
oryza_coarctata_PC_10217 Flavonoid F3H low borderline
oryza_coarctata_PC_10218 Flavonoid F3H low borderline
oryza_coarctata_PC_11650 Flavonoid F3H medium borderline
oryza_coarctata_PC_14599 Flavonoid F3H medium pass
oryza_coarctata_PC_14695 Flavonoid F3H low borderline
oryza_coarctata_PC_16633 Flavonoid F3H medium borderline
oryza_coarctata_PC_18795 Flavonoid F3H medium borderline
oryza_coarctata_PC_19436 Flavonoid F3H medium borderline
oryza_coarctata_PC_20186 Flavonoid F3H medium borderline
oryza_coarctata_PC_21092 Flavonoid F3H medium borderline
oryza_coarctata_PC_21377 Flavonoid F3H low borderline
oryza_coarctata_PC_23192 Flavonoid F3H medium borderline
oryza_coarctata_PC_23453 Flavonoid F3H medium borderline
oryza_coarctata_PC_24620 Flavonoid F3H low borderline
oryza_coarctata_PC_25209 Flavonoid F3H medium borderline
oryza_coarctata_PC_25350 Flavonoid F3H medium borderline
oryza_coarctata_PC_25409 Flavonoid F3H medium borderline
oryza_coarctata_PC_26555 Flavonoid F3H low borderline
oryza_coarctata_PC_27035 Flavonoid F3H low borderline
oryza_coarctata_PC_27695 Flavonoid F3H low borderline
oryza_coarctata_PC_29073 Flavonoid F3H medium borderline
oryza_coarctata_PC_29445 Flavonoid F3H medium pass
oryza_coarctata_PC_29717 Flavonoid F3H low borderline
oryza_coarctata_PC_30350 Flavonoid F3H medium borderline
oryza_coarctata_PC_30351 Flavonoid F3H medium borderline
oryza_coarctata_PC_30728 Flavonoid F3H medium borderline
oryza_coarctata_PC_32535 Flavonoid F3H medium borderline
oryza_coarctata_PC_32874 Flavonoid F3H medium borderline
oryza_coarctata_PC_33506 Flavonoid F3H low borderline
oryza_coarctata_PC_33509 Flavonoid F3H medium borderline
oryza_coarctata_PC_35954 Flavonoid F3H medium borderline
oryza_coarctata_PC_36490 Flavonoid F3H medium pass
oryza_coarctata_PC_36591 Flavonoid F3H medium borderline
oryza_coarctata_PC_37146 Flavonoid F3H medium borderline
oryza_coarctata_PC_37149 Flavonoid F3H medium borderline
oryza_coarctata_PC_37427 Flavonoid F3H medium borderline
oryza_coarctata_PC_37580 Flavonoid F3H medium borderline