PlantSME Plant secondary metabolism enzyme database

Oryza coarctata (oryza_coarctata)

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Imported from atlas release summary for Oryza coarctata.

1287
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 347 20 BAHD (149) View species results
Phenylpropanoid pathway 344 12 POD (178) View species results
Alkaloid pathway 254 19 NMT (49) View species results
Flavonoid pathway 150 14 UFGT (67) View species results
Rosmarinic acid pathway 110 7 C4H (40) View species results
Steroid pathway 82 10 CAS (35) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1166 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 261 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: LAC
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Gene Pathway Family Confidence Status Best Target
oryza_coarctata_PC_00454 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
oryza_coarctata_PC_00465 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
oryza_coarctata_PC_00677 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
oryza_coarctata_PC_02295 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
oryza_coarctata_PC_02302 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
oryza_coarctata_PC_04558 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
oryza_coarctata_PC_08373 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
oryza_coarctata_PC_08374 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
oryza_coarctata_PC_08463 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
oryza_coarctata_PC_09673 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
oryza_coarctata_PC_09674 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
oryza_coarctata_PC_10402 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
oryza_coarctata_PC_16089 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
oryza_coarctata_PC_21703 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
oryza_coarctata_PC_22528 Phenylpropanoid LAC low borderline LAC__00003__sp_Q84J37_LAC15_ARATH
oryza_coarctata_PC_24400 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
oryza_coarctata_PC_29028 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
oryza_coarctata_PC_32487 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
oryza_coarctata_PC_32733 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
oryza_coarctata_PC_32734 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
oryza_coarctata_PC_32736 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
oryza_coarctata_PC_33830 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
oryza_coarctata_PC_34037 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
oryza_coarctata_PC_39318 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
oryza_coarctata_PC_39826 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
oryza_coarctata_PC_39827 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
oryza_coarctata_PC_40598 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
oryza_coarctata_PC_41779 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
oryza_coarctata_PC_42793 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
oryza_coarctata_PC_44580 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
oryza_coarctata_PC_45731 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
oryza_coarctata_PC_46884 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
oryza_coarctata_PC_48676 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
oryza_coarctata_PC_48678 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
oryza_coarctata_PC_49284 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH