PlantSME Plant secondary metabolism enzyme database

Oryza coarctata (oryza_coarctata)

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Imported from atlas release summary for Oryza coarctata.

1287
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 347 20 BAHD (149) View species results
Phenylpropanoid pathway 344 12 POD (178) View species results
Alkaloid pathway 254 19 NMT (49) View species results
Flavonoid pathway 150 14 UFGT (67) View species results
Rosmarinic acid pathway 110 7 C4H (40) View species results
Steroid pathway 82 10 CAS (35) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1166 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 261 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TPS
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Gene Pathway Family Confidence Status Best Target
oryza_coarctata_PC_00804 Terpenoid TPS medium pass TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
oryza_coarctata_PC_02771 Terpenoid TPS medium pass TPS__00153__sp_Q29VN2_TPS2_MAIZE
oryza_coarctata_PC_06354 Terpenoid TPS medium pass TPS__00159__sp_Q5GJ59_TPS7_MAIZE
oryza_coarctata_PC_06674 Terpenoid TPS medium pass TPS__00153__sp_Q29VN2_TPS2_MAIZE
oryza_coarctata_PC_07775 Terpenoid TPS medium pass TPS__00004__sp_A0A0M5L832_TPS14_TRIWF
oryza_coarctata_PC_08087 Terpenoid TPS medium pass TPS__00167__sp_Q84ZW8_ACSS_MAIZE
oryza_coarctata_PC_08906 Terpenoid TPS medium pass TPS__00003__sp_A0A0M4M0T9_TPS28_TRIWF
oryza_coarctata_PC_12709 Terpenoid TPS medium pass TPS__00011__sp_A0A1D6LTV0_TPS26_MAIZE
oryza_coarctata_PC_16335 Terpenoid TPS medium pass TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
oryza_coarctata_PC_17668 Terpenoid TPS medium pass TPS__00003__sp_A0A0M4M0T9_TPS28_TRIWF
oryza_coarctata_PC_19356 Terpenoid TPS medium pass TPS__00003__sp_A0A0M4M0T9_TPS28_TRIWF
oryza_coarctata_PC_22111 Terpenoid TPS medium pass TPS__00159__sp_Q5GJ59_TPS7_MAIZE
oryza_coarctata_PC_22114 Terpenoid TPS medium pass TPS__00159__sp_Q5GJ59_TPS7_MAIZE
oryza_coarctata_PC_22117 Terpenoid TPS medium pass TPS__00159__sp_Q5GJ59_TPS7_MAIZE
oryza_coarctata_PC_22123 Terpenoid TPS low borderline TPS__00159__sp_Q5GJ59_TPS7_MAIZE
oryza_coarctata_PC_26542 Terpenoid TPS medium pass TPS__00151__sp_Q1EG72_TPS11_MAIZE
oryza_coarctata_PC_26777 Terpenoid TPS low borderline TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
oryza_coarctata_PC_27802 Terpenoid TPS medium pass TPS__00072__sp_C7E5V7_FARS_ZEAMM
oryza_coarctata_PC_30099 Terpenoid TPS medium pass TPS__00154__sp_Q29VN3_TPS8_MAIZE
oryza_coarctata_PC_40275 Terpenoid TPS low borderline TPS__00167__sp_Q84ZW8_ACSS_MAIZE
oryza_coarctata_PC_40276 Terpenoid TPS medium pass TPS__00167__sp_Q84ZW8_ACSS_MAIZE
oryza_coarctata_PC_40277 Terpenoid TPS low borderline TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
oryza_coarctata_PC_40285 Terpenoid TPS medium pass TPS__00167__sp_Q84ZW8_ACSS_MAIZE
oryza_coarctata_PC_41931 Terpenoid TPS medium pass TPS__00159__sp_Q5GJ59_TPS7_MAIZE
oryza_coarctata_PC_42131 Terpenoid TPS medium pass TPS__00010__sp_A0A1D6EFT8_EDSB_MAIZE
oryza_coarctata_PC_42132 Terpenoid TPS medium pass TPS__00010__sp_A0A1D6EFT8_EDSB_MAIZE
oryza_coarctata_PC_42137 Terpenoid TPS medium pass TPS__00010__sp_A0A1D6EFT8_EDSB_MAIZE
oryza_coarctata_PC_44867 Terpenoid TPS medium pass TPS__00058__sp_B2C4D0_TS23B_MAIZE
oryza_coarctata_PC_47048 Terpenoid TPS medium pass TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
oryza_coarctata_PC_47050 Terpenoid TPS medium pass TPS__00167__sp_Q84ZW8_ACSS_MAIZE
oryza_coarctata_PC_47051 Terpenoid TPS medium pass TPS__00167__sp_Q84ZW8_ACSS_MAIZE