PlantSME Plant secondary metabolism enzyme database

Oryza coarctata (oryza_coarctata)

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Imported from atlas release summary for Oryza coarctata.

1287
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 347 20 BAHD (149) View species results
Phenylpropanoid pathway 344 12 POD (178) View species results
Alkaloid pathway 254 19 NMT (49) View species results
Flavonoid pathway 150 14 UFGT (67) View species results
Rosmarinic acid pathway 110 7 C4H (40) View species results
Steroid pathway 82 10 CAS (35) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1166 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 261 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
oryza_coarctata_PC_24985 Steroid BR6OX2/CYP85A2 low borderline
oryza_coarctata_PC_25219 Steroid BR6OX2/CYP85A2 low borderline
oryza_coarctata_PC_25380 Steroid BR6OX2/CYP85A2 low borderline
oryza_coarctata_PC_28511 Steroid BR6OX2/CYP85A2 low borderline
oryza_coarctata_PC_29924 Steroid BR6OX2/CYP85A2 low borderline
oryza_coarctata_PC_30125 Steroid BR6OX2/CYP85A2 low borderline
oryza_coarctata_PC_32218 Steroid BR6OX2/CYP85A2 low borderline
oryza_coarctata_PC_32225 Steroid BR6OX2/CYP85A2 low borderline
oryza_coarctata_PC_32226 Steroid BR6OX2/CYP85A2 low borderline
oryza_coarctata_PC_33138 Steroid BR6OX2/CYP85A2 low borderline
oryza_coarctata_PC_33181 Steroid BR6OX2/CYP85A2 low borderline
oryza_coarctata_PC_33880 Steroid BR6OX2/CYP85A2 low borderline
oryza_coarctata_PC_35338 Steroid BR6OX2/CYP85A2 low borderline
oryza_coarctata_PC_36899 Steroid BR6OX2/CYP85A2 low borderline
oryza_coarctata_PC_37839 Steroid BR6OX2/CYP85A2 low borderline
oryza_coarctata_PC_38934 Steroid BR6OX2/CYP85A2 low borderline
oryza_coarctata_PC_39574 Steroid BR6OX2/CYP85A2 low borderline
oryza_coarctata_PC_39786 Steroid BR6OX2/CYP85A2 low borderline
oryza_coarctata_PC_46651 Steroid BR6OX2/CYP85A2 low borderline
oryza_coarctata_PC_47004 Steroid BR6OX2/CYP85A2 low borderline
oryza_coarctata_PC_47706 Steroid BR6OX2/CYP85A2 low borderline
oryza_coarctata_PC_48356 Steroid BR6OX2/CYP85A2 low borderline
oryza_coarctata_PC_49252 Steroid BR6OX2/CYP85A2 low borderline
oryza_coarctata_PC_00720 Steroid CAS medium pass
oryza_coarctata_PC_00721 Steroid CAS medium pass
oryza_coarctata_PC_00735 Steroid CAS medium pass
oryza_coarctata_PC_02771 Steroid CAS low borderline
oryza_coarctata_PC_03865 Steroid CAS medium pass
oryza_coarctata_PC_04135 Steroid CAS medium pass
oryza_coarctata_PC_04136 Steroid CAS medium pass
oryza_coarctata_PC_04137 Steroid CAS medium pass
oryza_coarctata_PC_07775 Steroid CAS medium pass
oryza_coarctata_PC_08087 Steroid CAS low borderline
oryza_coarctata_PC_08906 Steroid CAS medium pass
oryza_coarctata_PC_13868 Steroid CAS medium pass
oryza_coarctata_PC_13876 Steroid CAS medium pass
oryza_coarctata_PC_16198 Steroid CAS low borderline
oryza_coarctata_PC_16335 Steroid CAS medium pass
oryza_coarctata_PC_17668 Steroid CAS medium pass
oryza_coarctata_PC_19356 Steroid CAS medium pass
oryza_coarctata_PC_22712 Steroid CAS medium pass
oryza_coarctata_PC_27487 Steroid CAS medium pass
oryza_coarctata_PC_27493 Steroid CAS medium pass
oryza_coarctata_PC_27510 Steroid CAS medium pass
oryza_coarctata_PC_32694 Steroid CAS medium pass
oryza_coarctata_PC_32695 Steroid CAS medium pass
oryza_coarctata_PC_32696 Steroid CAS medium pass
oryza_coarctata_PC_32697 Steroid CAS medium pass
oryza_coarctata_PC_33136 Steroid CAS medium pass
oryza_coarctata_PC_33137 Steroid CAS medium pass