PlantSME Plant secondary metabolism enzyme database

Oryza coarctata (oryza_coarctata)

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Imported from atlas release summary for Oryza coarctata.

1287
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 347 20 BAHD (149) View species results
Phenylpropanoid pathway 344 12 POD (178) View species results
Alkaloid pathway 254 19 NMT (49) View species results
Flavonoid pathway 150 14 UFGT (67) View species results
Rosmarinic acid pathway 110 7 C4H (40) View species results
Steroid pathway 82 10 CAS (35) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1166 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 261 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
oryza_coarctata_PC_00464 Alkaloid COR low borderline
oryza_coarctata_PC_04546 Alkaloid COR medium pass
oryza_coarctata_PC_09566 Alkaloid COR medium pass
oryza_coarctata_PC_15890 Alkaloid COR low borderline
oryza_coarctata_PC_20434 Alkaloid COR medium pass
oryza_coarctata_PC_32138 Alkaloid COR medium pass
oryza_coarctata_PC_32146 Alkaloid COR medium pass
oryza_coarctata_PC_42510 Alkaloid COR medium pass
oryza_coarctata_PC_48439 Alkaloid COR medium pass
oryza_coarctata_PC_02806 Alkaloid CYP719 medium borderline
oryza_coarctata_PC_04132 Alkaloid CYP719 medium borderline
oryza_coarctata_PC_11826 Alkaloid CYP719 medium borderline
oryza_coarctata_PC_18185 Alkaloid CYP719 medium borderline
oryza_coarctata_PC_19665 Alkaloid CYP719 medium borderline
oryza_coarctata_PC_22445 Alkaloid CYP719 low borderline
oryza_coarctata_PC_33138 Alkaloid CYP719 medium borderline
oryza_coarctata_PC_14391 Alkaloid CYP80B1 low borderline
oryza_coarctata_PC_18332 Alkaloid CYP80B1 low borderline
oryza_coarctata_PC_29171 Alkaloid CYP80B1 medium borderline
oryza_coarctata_PC_30152 Alkaloid CYP80B1 medium borderline
oryza_coarctata_PC_47512 Alkaloid CYP80B1 medium borderline
oryza_coarctata_PC_05746 Alkaloid CYP80F1 low borderline
oryza_coarctata_PC_07664 Alkaloid CYP80F1 low borderline
oryza_coarctata_PC_41539 Alkaloid CYP80F1 medium borderline
oryza_coarctata_PC_48116 Alkaloid CYP80F1 medium borderline
oryza_coarctata_PC_06705 Alkaloid G8O/G8H medium borderline
oryza_coarctata_PC_07330 Alkaloid G8O/G8H medium borderline
oryza_coarctata_PC_12368 Alkaloid G8O/G8H medium borderline
oryza_coarctata_PC_12770 Alkaloid G8O/G8H medium borderline
oryza_coarctata_PC_12784 Alkaloid G8O/G8H medium borderline
oryza_coarctata_PC_13724 Alkaloid G8O/G8H medium borderline
oryza_coarctata_PC_14648 Alkaloid G8O/G8H medium pass
oryza_coarctata_PC_14653 Alkaloid G8O/G8H medium borderline
oryza_coarctata_PC_14692 Alkaloid G8O/G8H medium borderline
oryza_coarctata_PC_14693 Alkaloid G8O/G8H medium borderline
oryza_coarctata_PC_14939 Alkaloid G8O/G8H medium borderline
oryza_coarctata_PC_16336 Alkaloid G8O/G8H medium borderline
oryza_coarctata_PC_16365 Alkaloid G8O/G8H medium borderline
oryza_coarctata_PC_18470 Alkaloid G8O/G8H medium borderline
oryza_coarctata_PC_18474 Alkaloid G8O/G8H low borderline
oryza_coarctata_PC_18855 Alkaloid G8O/G8H medium borderline
oryza_coarctata_PC_19588 Alkaloid G8O/G8H low borderline
oryza_coarctata_PC_19659 Alkaloid G8O/G8H medium borderline
oryza_coarctata_PC_19662 Alkaloid G8O/G8H medium borderline
oryza_coarctata_PC_20649 Alkaloid G8O/G8H medium borderline
oryza_coarctata_PC_20777 Alkaloid G8O/G8H low borderline
oryza_coarctata_PC_23640 Alkaloid G8O/G8H medium borderline
oryza_coarctata_PC_23653 Alkaloid G8O/G8H low borderline
oryza_coarctata_PC_24198 Alkaloid G8O/G8H medium borderline
oryza_coarctata_PC_24201 Alkaloid G8O/G8H medium borderline