PlantSME Plant secondary metabolism enzyme database

Oryza longistaminata (oryza_longistaminata)

Imported from atlas release summary for Oryza longistaminata.

1740
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 461 19 BAHD (151) View species results
Alkaloid pathway 386 24 7DLGT (74) View species results
Phenylpropanoid pathway 383 13 POD (164) View species results
Flavonoid pathway 221 13 UFGT (108) View species results
Rosmarinic acid pathway 180 7 C4H (110) View species results
Steroid pathway 109 14 SMT1/SMT2/SMT3 (45) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1898 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 267 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 7DLGT
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Gene Pathway Family Confidence Status
KN540522.1_FGP003 Alkaloid 7DLGT medium pass
KN540540.1_FGP006 Alkaloid 7DLGT medium pass
KN540620.1_FGP001 Alkaloid 7DLGT low borderline
KN540620.1_FGP002 Alkaloid 7DLGT medium pass
KN540620.1_FGP008 Alkaloid 7DLGT medium pass
KN540666.1_FGP002 Alkaloid 7DLGT low borderline
KN540728.1_FGP003 Alkaloid 7DLGT low borderline
KN540785.1_FGP004 Alkaloid 7DLGT low borderline
KN540812.1_FGP002 Alkaloid 7DLGT medium pass
KN540812.1_FGP005 Alkaloid 7DLGT low borderline
KN540823.1_FGP002 Alkaloid 7DLGT low borderline
KN540823.1_FGP005 Alkaloid 7DLGT medium pass
KN540835.1_FGP001 Alkaloid 7DLGT low borderline
KN540849.1_FGP003 Alkaloid 7DLGT low borderline
KN540941.1_FGP001 Alkaloid 7DLGT high pass
KN541011.1_FGP001 Alkaloid 7DLGT low borderline
KN541011.1_FGP002 Alkaloid 7DLGT medium pass
KN541032.1_FGP001 Alkaloid 7DLGT low borderline
KN541150.1_FGP002 Alkaloid 7DLGT low borderline
KN541168.1_FGP003 Alkaloid 7DLGT low borderline
KN541197.1_FGP001 Alkaloid 7DLGT low borderline
KN541218.1_FGP001 Alkaloid 7DLGT medium pass
KN541218.1_FGP002 Alkaloid 7DLGT medium pass
KN541274.1_FGP002 Alkaloid 7DLGT medium pass
KN541328.1_FGP002 Alkaloid 7DLGT low borderline
KN541345.1_FGP003 Alkaloid 7DLGT high pass
KN541663.1_FGP001 Alkaloid 7DLGT low borderline
KN541737.1_FGP001 Alkaloid 7DLGT low borderline
KN541737.1_FGP004 Alkaloid 7DLGT medium pass
KN541810.1_FGP001 Alkaloid 7DLGT low borderline
KN541810.1_FGP002 Alkaloid 7DLGT low borderline
KN541956.1_FGP004 Alkaloid 7DLGT low borderline
KN542037.1_FGP001 Alkaloid 7DLGT medium pass
KN542050.1_FGP001 Alkaloid 7DLGT medium pass
KN542050.1_FGP003 Alkaloid 7DLGT medium pass
KN542170.1_FGP002 Alkaloid 7DLGT medium pass
KN542502.1_FGP001 Alkaloid 7DLGT high pass
KN542809.1_FGP001 Alkaloid 7DLGT medium pass
KN543125.1_FGP001 Alkaloid 7DLGT low borderline
KN543125.1_FGP002 Alkaloid 7DLGT medium pass
KN543839.1_FGP001 Alkaloid 7DLGT medium pass
KN544251.1_FGP001 Alkaloid 7DLGT low borderline
KN544513.1_FGP001 Alkaloid 7DLGT low borderline