PlantSME Plant secondary metabolism enzyme database

Oryza longistaminata (oryza_longistaminata)

Imported from atlas release summary for Oryza longistaminata.

1740
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 461 19 BAHD (151) View species results
Alkaloid pathway 386 24 7DLGT (74) View species results
Phenylpropanoid pathway 383 13 POD (164) View species results
Flavonoid pathway 221 13 UFGT (108) View species results
Rosmarinic acid pathway 180 7 C4H (110) View species results
Steroid pathway 109 14 SMT1/SMT2/SMT3 (45) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1898 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 267 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CAD
Reset
Gene Pathway Family Confidence Status
AMDW01020759.1_FGP001 Phenylpropanoid CAD medium pass
AMDW01021235.1_FGP001 Phenylpropanoid CAD medium pass
AMDW01027177.1_FGP001 Phenylpropanoid CAD medium pass
AMDW01033367.1_FGP001 Phenylpropanoid CAD medium pass
AMDW01040816.1_FGP001 Phenylpropanoid CAD medium pass
AMDW01070070.1_FGP001 Phenylpropanoid CAD medium borderline
AMDW01074352.1_FGP001 Phenylpropanoid CAD medium pass
AMDW01077968.1_FGP001 Phenylpropanoid CAD medium borderline
KN538682.1_FGP020 Phenylpropanoid CAD medium pass
KN538739.1_FGP011 Phenylpropanoid CAD medium pass
KN538761.1_FGP033 Phenylpropanoid CAD low borderline
KN538769.1_FGP035 Phenylpropanoid CAD medium borderline
KN538777.1_FGP005 Phenylpropanoid CAD low borderline
KN538808.1_FGP043 Phenylpropanoid CAD medium pass
KN538815.1_FGP013 Phenylpropanoid CAD medium borderline
KN538895.1_FGP031 Phenylpropanoid CAD medium borderline
KN538942.1_FGP013 Phenylpropanoid CAD low borderline
KN539031.1_FGP017 Phenylpropanoid CAD medium pass
KN539034.1_FGP008 Phenylpropanoid CAD low borderline
KN539034.1_FGP015 Phenylpropanoid CAD medium pass
KN539034.1_FGP017 Phenylpropanoid CAD medium pass
KN539035.1_FGP008 Phenylpropanoid CAD medium pass
KN539124.1_FGP006 Phenylpropanoid CAD medium pass
KN539124.1_FGP010 Phenylpropanoid CAD medium pass
KN539210.1_FGP002 Phenylpropanoid CAD low borderline
KN539210.1_FGP003 Phenylpropanoid CAD medium pass
KN539210.1_FGP004 Phenylpropanoid CAD low borderline
KN539278.1_FGP007 Phenylpropanoid CAD medium pass
KN539304.1_FGP005 Phenylpropanoid CAD low borderline
KN539324.1_FGP003 Phenylpropanoid CAD low borderline
KN539333.1_FGP004 Phenylpropanoid CAD low borderline
KN539448.1_FGP005 Phenylpropanoid CAD low borderline
KN539669.1_FGP002 Phenylpropanoid CAD medium pass
KN539709.1_FGP002 Phenylpropanoid CAD low borderline
KN539921.1_FGP001 Phenylpropanoid CAD low borderline
KN539921.1_FGP004 Phenylpropanoid CAD low borderline
KN540101.1_FGP001 Phenylpropanoid CAD low borderline
KN540171.1_FGP001 Phenylpropanoid CAD medium pass
KN540171.1_FGP003 Phenylpropanoid CAD medium pass
KN540171.1_FGP006 Phenylpropanoid CAD medium pass
KN540308.1_FGP001 Phenylpropanoid CAD low borderline
KN540312.1_FGP002 Phenylpropanoid CAD low borderline
KN540312.1_FGP003 Phenylpropanoid CAD medium pass
KN540481.1_FGP003 Phenylpropanoid CAD low borderline
KN540657.1_FGP001 Phenylpropanoid CAD low borderline
KN540669.1_FGP005 Phenylpropanoid CAD medium borderline
KN540727.1_FGP002 Phenylpropanoid CAD low borderline
KN540805.1_FGP001 Phenylpropanoid CAD low borderline
KN541175.1_FGP002 Phenylpropanoid CAD low borderline
KN541330.1_FGP001 Phenylpropanoid CAD medium pass