PlantSME Plant secondary metabolism enzyme database

Oryza longistaminata (oryza_longistaminata)

Imported from atlas release summary for Oryza longistaminata.

1740
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 461 19 BAHD (151) View species results
Alkaloid pathway 386 24 7DLGT (74) View species results
Phenylpropanoid pathway 383 13 POD (164) View species results
Flavonoid pathway 221 13 UFGT (108) View species results
Rosmarinic acid pathway 180 7 C4H (110) View species results
Steroid pathway 109 14 SMT1/SMT2/SMT3 (45) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1898 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 267 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP76
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Gene Pathway Family Confidence Status
KN538933.1_FGP003 Terpenoid CYP76 medium borderline
KN538933.1_FGP009 Terpenoid CYP76 medium borderline
KN538933.1_FGP015 Terpenoid CYP76 medium borderline
KN538933.1_FGP017 Terpenoid CYP76 medium borderline
KN538982.1_FGP002 Terpenoid CYP76 medium borderline
KN538982.1_FGP005 Terpenoid CYP76 medium borderline
KN538982.1_FGP010 Terpenoid CYP76 medium pass
KN538991.1_FGP010 Terpenoid CYP76 medium borderline
KN538991.1_FGP014 Terpenoid CYP76 medium pass
KN539065.1_FGP006 Terpenoid CYP76 medium borderline
KN539116.1_FGP015 Terpenoid CYP76 low borderline
KN539146.1_FGP003 Terpenoid CYP76 low borderline
KN539170.1_FGP007 Terpenoid CYP76 medium pass
KN539228.1_FGP010 Terpenoid CYP76 medium borderline
KN539251.1_FGP006 Terpenoid CYP76 medium borderline
KN539270.1_FGP006 Terpenoid CYP76 medium pass
KN539306.1_FGP009 Terpenoid CYP76 medium pass
KN539315.1_FGP009 Terpenoid CYP76 low borderline
KN539335.1_FGP004 Terpenoid CYP76 low borderline
KN539350.1_FGP007 Terpenoid CYP76 medium pass
KN539383.1_FGP007 Terpenoid CYP76 low borderline
KN539400.1_FGP010 Terpenoid CYP76 low borderline
KN539400.1_FGP017 Terpenoid CYP76 low borderline
KN539407.1_FGP001 Terpenoid CYP76 medium borderline
KN539407.1_FGP002 Terpenoid CYP76 medium borderline
KN539407.1_FGP004 Terpenoid CYP76 medium borderline
KN539407.1_FGP005 Terpenoid CYP76 medium borderline
KN539407.1_FGP009 Terpenoid CYP76 medium borderline
KN539421.1_FGP011 Terpenoid CYP76 low borderline
KN539470.1_FGP013 Terpenoid CYP76 medium borderline
KN539474.1_FGP005 Terpenoid CYP76 medium pass
KN539474.1_FGP007 Terpenoid CYP76 low borderline
KN539476.1_FGP006 Terpenoid CYP76 medium borderline
KN539490.1_FGP004 Terpenoid CYP76 low borderline
KN539498.1_FGP010 Terpenoid CYP76 low borderline
KN539502.1_FGP004 Terpenoid CYP76 medium pass
KN539502.1_FGP007 Terpenoid CYP76 medium pass
KN539577.1_FGP001 Terpenoid CYP76 medium borderline
KN539577.1_FGP006 Terpenoid CYP76 medium borderline
KN539596.1_FGP005 Terpenoid CYP76 medium borderline
KN539620.1_FGP006 Terpenoid CYP76 low borderline
KN539665.1_FGP003 Terpenoid CYP76 low borderline
KN539675.1_FGP004 Terpenoid CYP76 low borderline
KN539715.1_FGP006 Terpenoid CYP76 medium borderline
KN539727.1_FGP002 Terpenoid CYP76 medium borderline
KN539747.1_FGP002 Terpenoid CYP76 medium borderline
KN539747.1_FGP003 Terpenoid CYP76 medium pass
KN539747.1_FGP006 Terpenoid CYP76 medium pass
KN539794.1_FGP006 Terpenoid CYP76 medium pass
KN539833.1_FGP001 Terpenoid CYP76 low borderline