PlantSME Plant secondary metabolism enzyme database

Oryza longistaminata (oryza_longistaminata)

Imported from atlas release summary for Oryza longistaminata.

1740
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 461 19 BAHD (151) View species results
Alkaloid pathway 386 24 7DLGT (74) View species results
Phenylpropanoid pathway 383 13 POD (164) View species results
Flavonoid pathway 221 13 UFGT (108) View species results
Rosmarinic acid pathway 180 7 C4H (110) View species results
Steroid pathway 109 14 SMT1/SMT2/SMT3 (45) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1898 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 267 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
AMDW01039553.1_FGP001 Flavonoid 4CL medium pass
KN538681.1_FGP060 Flavonoid 4CL medium pass
KN538682.1_FGP139 Flavonoid 4CL medium pass
KN538684.1_FGP016 Flavonoid 4CL medium pass
KN538699.1_FGP004 Flavonoid 4CL low borderline
KN538705.1_FGP009 Flavonoid 4CL medium pass
KN538712.1_FGP061 Flavonoid 4CL low borderline
KN538713.1_FGP089 Flavonoid 4CL low borderline
KN538715.1_FGP056 Flavonoid 4CL low borderline
KN538717.1_FGP019 Flavonoid 4CL medium pass
KN538737.1_FGP049 Flavonoid 4CL medium pass
KN538743.1_FGP010 Flavonoid 4CL medium pass
KN538743.1_FGP016 Flavonoid 4CL medium pass
KN538767.1_FGP032 Flavonoid 4CL medium pass
KN538795.1_FGP012 Flavonoid 4CL medium pass
KN538807.1_FGP055 Flavonoid 4CL medium pass
KN538819.1_FGP011 Flavonoid 4CL low borderline
KN538839.1_FGP002 Flavonoid 4CL medium pass
KN538902.1_FGP002 Flavonoid 4CL medium pass
KN538902.1_FGP007 Flavonoid 4CL medium pass
KN538950.1_FGP010 Flavonoid 4CL medium pass
KN538983.1_FGP020 Flavonoid 4CL medium pass
KN538997.1_FGP012 Flavonoid 4CL low borderline
KN539018.1_FGP008 Flavonoid 4CL low borderline
KN539205.1_FGP019 Flavonoid 4CL medium pass
KN539217.1_FGP003 Flavonoid 4CL low borderline
KN539413.1_FGP009 Flavonoid 4CL medium pass
KN539445.1_FGP008 Flavonoid 4CL low borderline
KN539583.1_FGP007 Flavonoid 4CL medium pass
KN539832.1_FGP011 Flavonoid 4CL low borderline
KN539881.1_FGP007 Flavonoid 4CL low borderline
KN540074.1_FGP001 Flavonoid 4CL medium pass
KN540074.1_FGP010 Flavonoid 4CL medium pass
KN540508.1_FGP003 Flavonoid 4CL low borderline
KN540744.1_FGP002 Flavonoid 4CL low borderline
KN540942.1_FGP002 Flavonoid 4CL medium pass
KN541308.1_FGP001 Flavonoid 4CL medium pass
KN541354.1_FGP002 Flavonoid 4CL low borderline
KN541575.1_FGP001 Flavonoid 4CL medium pass
KN541952.1_FGP001 Flavonoid 4CL medium pass
KN542414.1_FGP001 Flavonoid 4CL medium pass
KN545012.1_FGP001 Flavonoid 4CL medium pass
AMDW01019931.1_FGP001 Flavonoid ANR medium borderline
AMDW01070070.1_FGP001 Flavonoid ANR medium borderline
AMDW01077968.1_FGP001 Flavonoid ANR high pass
AMDW01081456.1_FGP001 Flavonoid ANR medium borderline
KN538705.1_FGP047 Flavonoid ANR medium borderline
KN538742.1_FGP050 Flavonoid ANR medium pass
KN538769.1_FGP035 Flavonoid ANR medium borderline
KN538814.1_FGP007 Flavonoid ANR low borderline