PlantSME Plant secondary metabolism enzyme database

Oryza longistaminata (oryza_longistaminata)

Imported from atlas release summary for Oryza longistaminata.

1740
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 461 19 BAHD (151) View species results
Alkaloid pathway 386 24 7DLGT (74) View species results
Phenylpropanoid pathway 383 13 POD (164) View species results
Flavonoid pathway 221 13 UFGT (108) View species results
Rosmarinic acid pathway 180 7 C4H (110) View species results
Steroid pathway 109 14 SMT1/SMT2/SMT3 (45) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1898 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 267 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
AMDW01034259.1_FGP001 Steroid BR6OX1/CYP85A1 low borderline
KN538719.1_FGP040 Steroid BR6OX1/CYP85A1 medium borderline
KN538727.1_FGP003 Steroid BR6OX1/CYP85A1 medium borderline
KN538750.1_FGP014 Steroid BR6OX1/CYP85A1 medium borderline
KN538750.1_FGP052 Steroid BR6OX1/CYP85A1 medium borderline
KN538761.1_FGP045 Steroid BR6OX1/CYP85A1 medium borderline
KN538793.1_FGP013 Steroid BR6OX1/CYP85A1 low borderline
KN538886.1_FGP007 Steroid BR6OX1/CYP85A1 medium borderline
KN538900.1_FGP002 Steroid BR6OX1/CYP85A1 medium borderline
KN538900.1_FGP004 Steroid BR6OX1/CYP85A1 medium borderline
KN538900.1_FGP007 Steroid BR6OX1/CYP85A1 medium borderline
KN538900.1_FGP008 Steroid BR6OX1/CYP85A1 medium borderline
KN538900.1_FGP011 Steroid BR6OX1/CYP85A1 medium borderline
KN538900.1_FGP015 Steroid BR6OX1/CYP85A1 medium borderline
KN538986.1_FGP014 Steroid BR6OX1/CYP85A1 medium borderline
KN538991.1_FGP010 Steroid BR6OX1/CYP85A1 low borderline
KN539270.1_FGP006 Steroid BR6OX1/CYP85A1 medium borderline
KN539335.1_FGP004 Steroid BR6OX1/CYP85A1 medium borderline
KN539689.1_FGP002 Steroid BR6OX1/CYP85A1 low borderline
KN540042.1_FGP002 Steroid BR6OX1/CYP85A1 medium borderline
KN540182.1_FGP004 Steroid BR6OX1/CYP85A1 medium borderline
KN540281.1_FGP001 Steroid BR6OX1/CYP85A1 low borderline
KN540281.1_FGP003 Steroid BR6OX1/CYP85A1 low borderline
KN540481.1_FGP001 Steroid BR6OX1/CYP85A1 medium borderline
KN540542.1_FGP001 Steroid BR6OX1/CYP85A1 medium borderline
KN540542.1_FGP003 Steroid BR6OX1/CYP85A1 medium borderline
KN541315.1_FGP002 Steroid BR6OX1/CYP85A1 medium borderline
KN541802.1_FGP001 Steroid BR6OX1/CYP85A1 medium borderline
KN542345.1_FGP001 Steroid BR6OX1/CYP85A1 medium borderline
KN542690.1_FGP001 Steroid BR6OX1/CYP85A1 low borderline
KN543142.1_FGP001 Steroid BR6OX1/CYP85A1 medium borderline
KN544255.1_FGP001 Steroid BR6OX1/CYP85A1 medium borderline
KN545327.1_FGP001 Steroid BR6OX1/CYP85A1 medium borderline
AMDW01012734.1_FGP001 Steroid BR6OX2/CYP85A2 low borderline
AMDW01014525.1_FGP001 Steroid BR6OX2/CYP85A2 low borderline
AMDW01027467.1_FGP001 Steroid BR6OX2/CYP85A2 low borderline
AMDW01031540.1_FGP001 Steroid BR6OX2/CYP85A2 low borderline
AMDW01031869.1_FGP001 Steroid BR6OX2/CYP85A2 low borderline
AMDW01037912.1_FGP001 Steroid BR6OX2/CYP85A2 low borderline
AMDW01038693.1_FGP001 Steroid BR6OX2/CYP85A2 low borderline
AMDW01040597.1_FGP001 Steroid BR6OX2/CYP85A2 low borderline
AMDW01040656.1_FGP001 Steroid BR6OX2/CYP85A2 low borderline
AMDW01061941.1_FGP001 Steroid BR6OX2/CYP85A2 low borderline
KN538682.1_FGP209 Steroid BR6OX2/CYP85A2 low borderline
KN538684.1_FGP142 Steroid BR6OX2/CYP85A2 low borderline
KN538687.1_FGP132 Steroid BR6OX2/CYP85A2 low borderline
KN538690.1_FGP128 Steroid BR6OX2/CYP85A2 low borderline
KN538691.1_FGP143 Steroid BR6OX2/CYP85A2 low borderline
KN538691.1_FGP150 Steroid BR6OX2/CYP85A2 low borderline
KN538701.1_FGP041 Steroid BR6OX2/CYP85A2 low borderline