PlantSME Plant secondary metabolism enzyme database

Oryza longistaminata (oryza_longistaminata)

Imported from atlas release summary for Oryza longistaminata.

1740
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 461 19 BAHD (151) View species results
Alkaloid pathway 386 24 7DLGT (74) View species results
Phenylpropanoid pathway 383 13 POD (164) View species results
Flavonoid pathway 221 13 UFGT (108) View species results
Rosmarinic acid pathway 180 7 C4H (110) View species results
Steroid pathway 109 14 SMT1/SMT2/SMT3 (45) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1898 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 267 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Gene Pathway Family Confidence Status
KN538769.1_FGP010 Terpenoid AACT medium borderline
KN538769.1_FGP039 Terpenoid AACT medium borderline
KN538806.1_FGP003 Terpenoid AACT low borderline
KN538831.1_FGP020 Terpenoid AACT medium borderline
KN538940.1_FGP015 Terpenoid AACT medium borderline
KN539631.1_FGP005 Terpenoid AACT medium borderline
KN541059.1_FGP004 Terpenoid AACT low borderline
AMDW01014565.1_FGP001 Terpenoid BAHD medium pass
AMDW01019011.1_FGP001 Terpenoid BAHD medium pass
AMDW01031130.1_FGP001 Terpenoid BAHD low borderline
AMDW01033784.1_FGP001 Terpenoid BAHD medium pass
AMDW01034761.1_FGP001 Terpenoid BAHD medium pass
AMDW01035064.1_FGP001 Terpenoid BAHD medium pass
AMDW01036625.1_FGP001 Terpenoid BAHD medium pass
AMDW01037350.1_FGP001 Terpenoid BAHD medium pass
AMDW01037380.1_FGP001 Terpenoid BAHD medium pass
AMDW01037714.1_FGP001 Terpenoid BAHD medium pass
AMDW01040535.1_FGP001 Terpenoid BAHD medium pass
AMDW01049996.1_FGP001 Terpenoid BAHD medium pass
AMDW01062647.1_FGP001 Terpenoid BAHD medium pass
AMDW01127471.1_FGP001 Terpenoid BAHD medium pass
KN538684.1_FGP104 Terpenoid BAHD low borderline
KN538684.1_FGP109 Terpenoid BAHD medium pass
KN538687.1_FGP063 Terpenoid BAHD medium pass
KN538690.1_FGP003 Terpenoid BAHD medium pass
KN538690.1_FGP130 Terpenoid BAHD medium pass
KN538690.1_FGP140 Terpenoid BAHD medium pass
KN538703.1_FGP091 Terpenoid BAHD medium pass
KN538703.1_FGP095 Terpenoid BAHD medium pass
KN538709.1_FGP002 Terpenoid BAHD low borderline
KN538710.1_FGP037 Terpenoid BAHD low borderline
KN538710.1_FGP060 Terpenoid BAHD medium pass
KN538715.1_FGP004 Terpenoid BAHD medium pass
KN538731.1_FGP041 Terpenoid BAHD medium pass
KN538732.1_FGP030 Terpenoid BAHD low borderline
KN538733.1_FGP012 Terpenoid BAHD low borderline
KN538735.1_FGP053 Terpenoid BAHD medium pass
KN538740.1_FGP003 Terpenoid BAHD low borderline
KN538740.1_FGP010 Terpenoid BAHD low borderline
KN538742.1_FGP011 Terpenoid BAHD medium pass
KN538750.1_FGP003 Terpenoid BAHD medium pass
KN538750.1_FGP016 Terpenoid BAHD medium pass
KN538760.1_FGP014 Terpenoid BAHD low borderline
KN538760.1_FGP059 Terpenoid BAHD medium pass
KN538762.1_FGP011 Terpenoid BAHD low borderline
KN538771.1_FGP037 Terpenoid BAHD medium pass
KN538776.1_FGP013 Terpenoid BAHD medium pass
KN538779.1_FGP002 Terpenoid BAHD medium pass
KN538784.1_FGP012 Terpenoid BAHD low borderline
KN538785.1_FGP011 Terpenoid BAHD low borderline