PlantSME Plant secondary metabolism enzyme database

Oryza longistaminata (oryza_longistaminata)

Imported from atlas release summary for Oryza longistaminata.

2086
Candidate Protein Records
1740
Pathway-Level Records
4443
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 461 19 BAHD (151) View species results
Alkaloid pathway 386 24 7DLGT (74) View species results
Phenylpropanoid pathway 383 13 POD (164) View species results
Flavonoid pathway 221 13 UFGT (108) View species results
Rosmarinic acid pathway 180 7 C4H (110) View species results
Steroid pathway 109 14 SMT1/SMT2/SMT3 (45) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1898 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 267 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
KN541310.1_FGP001 Terpenoid CYP76 medium pass
KN541397.1_FGP001 Terpenoid CYP76 low borderline
KN541466.1_FGP001 Terpenoid CYP76 medium borderline
KN541492.1_FGP001 Terpenoid CYP76 low borderline
KN541672.1_FGP001 Terpenoid CYP76 low borderline
KN541966.1_FGP001 Terpenoid CYP76 medium pass
KN541978.1_FGP001 Terpenoid CYP76 medium pass
KN542033.1_FGP002 Terpenoid CYP76 medium borderline
KN542345.1_FGP001 Terpenoid CYP76 medium borderline
KN542591.1_FGP001 Terpenoid CYP76 medium borderline
KN542593.1_FGP001 Terpenoid CYP76 medium pass
KN543142.1_FGP001 Terpenoid CYP76 medium borderline
KN543557.1_FGP001 Terpenoid CYP76 low borderline
KN543713.1_FGP001 Terpenoid CYP76 medium borderline
KN543736.1_FGP002 Terpenoid CYP76 medium pass
KN545476.1_FGP001 Terpenoid CYP76 medium borderline
KN546512.1_FGP001 Terpenoid CYP76 medium borderline
KN546693.1_FGP001 Terpenoid CYP76 low borderline
KN538831.1_FGP021 Terpenoid DXR high pass
AMDW01039493.1_FGP001 Terpenoid DXS medium pass
KN538753.1_FGP046 Terpenoid DXS medium pass
KN538753.1_FGP054 Terpenoid DXS medium pass
KN539140.1_FGP002 Terpenoid DXS medium pass
KN539267.1_FGP003 Terpenoid DXS medium pass
AMDW01015468.1_FGP001 Terpenoid FPPS medium pass
AMDW01035872.1_FGP001 Terpenoid FPPS medium pass
AMDW01037374.1_FGP001 Terpenoid FPPS medium pass
KN538697.1_FGP017 Terpenoid FPPS medium pass
KN538751.1_FGP057 Terpenoid FPPS medium pass
KN538768.1_FGP010 Terpenoid FPPS low borderline
KN538955.1_FGP008 Terpenoid FPPS medium pass
KN538956.1_FGP007 Terpenoid FPPS low borderline
KN539256.1_FGP005 Terpenoid FPPS medium pass
KN539256.1_FGP011 Terpenoid FPPS medium pass
KN540011.1_FGP002 Terpenoid FPPS medium pass
KN540045.1_FGP004 Terpenoid FPPS low borderline
KN538800.1_FGP006 Terpenoid GGPPS medium borderline
KN539163.1_FGP001 Terpenoid GGPPS medium borderline
KN540796.1_FGP001 Terpenoid GGPPS medium borderline
KN541284.1_FGP003 Terpenoid GGPPS medium borderline
KN541872.1_FGP001 Terpenoid GGPPS medium borderline
KN538951.1_FGP007 Terpenoid HDR/IspH low borderline
KN539008.1_FGP003 Terpenoid HDR/IspH high pass
KN539008.1_FGP005 Terpenoid HDR/IspH high pass
AMDW01040559.1_FGP001 Terpenoid HDS/IspG medium pass
KN539183.1_FGP015 Terpenoid HDS/IspG high pass
KN538856.1_FGP039 Terpenoid HMGR medium pass
KN539198.1_FGP002 Terpenoid HMGR medium pass
KN539799.1_FGP007 Terpenoid HMGR medium pass
KN538885.1_FGP008 Terpenoid HMGS high pass