PlantSME Plant secondary metabolism enzyme database

Oryza longistaminata (oryza_longistaminata)

Imported from atlas release summary for Oryza longistaminata.

2086
Candidate Protein Records
1740
Pathway-Level Records
4443
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 461 19 BAHD (151) View species results
Alkaloid pathway 386 24 7DLGT (74) View species results
Phenylpropanoid pathway 383 13 POD (164) View species results
Flavonoid pathway 221 13 UFGT (108) View species results
Rosmarinic acid pathway 180 7 C4H (110) View species results
Steroid pathway 109 14 SMT1/SMT2/SMT3 (45) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1898 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 267 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
KN538900.1_FGP004 Alkaloid T16H medium borderline
KN538991.1_FGP014 Alkaloid T16H low borderline
KN539031.1_FGP001 Alkaloid T16H medium borderline
KN539031.1_FGP004 Alkaloid T16H medium borderline
KN539396.1_FGP005 Alkaloid T16H medium borderline
KN539474.1_FGP005 Alkaloid T16H low borderline
KN539490.1_FGP004 Alkaloid T16H medium borderline
KN539620.1_FGP006 Alkaloid T16H medium borderline
KN539665.1_FGP003 Alkaloid T16H low borderline
KN539747.1_FGP002 Alkaloid T16H medium borderline
KN539747.1_FGP003 Alkaloid T16H medium borderline
KN539747.1_FGP006 Alkaloid T16H medium borderline
KN539747.1_FGP008 Alkaloid T16H medium borderline
KN539747.1_FGP009 Alkaloid T16H medium borderline
KN539747.1_FGP010 Alkaloid T16H medium borderline
KN539794.1_FGP001 Alkaloid T16H low borderline
KN539794.1_FGP003 Alkaloid T16H low borderline
KN539873.1_FGP002 Alkaloid T16H medium borderline
KN540075.1_FGP001 Alkaloid T16H low borderline
KN540235.1_FGP004 Alkaloid T16H low borderline
KN540273.1_FGP001 Alkaloid T16H medium borderline
KN540275.1_FGP003 Alkaloid T16H medium borderline
KN540386.1_FGP002 Alkaloid T16H medium borderline
KN540449.1_FGP003 Alkaloid T16H medium borderline
KN540734.1_FGP001 Alkaloid T16H medium borderline
KN540753.1_FGP004 Alkaloid T16H medium borderline
KN540875.1_FGP003 Alkaloid T16H medium borderline
KN541256.1_FGP002 Alkaloid T16H medium borderline
KN541492.1_FGP001 Alkaloid T16H medium borderline
KN542593.1_FGP001 Alkaloid T16H medium borderline
KN543557.1_FGP001 Alkaloid T16H medium borderline
KN546512.1_FGP001 Alkaloid T16H medium borderline
AMDW01012734.1_FGP001 Alkaloid T3O medium borderline
AMDW01012857.1_FGP001 Alkaloid T3O medium borderline
AMDW01014525.1_FGP001 Alkaloid T3O medium borderline
AMDW01027467.1_FGP001 Alkaloid T3O medium borderline
AMDW01028745.1_FGP001 Alkaloid T3O low borderline
AMDW01031540.1_FGP001 Alkaloid T3O medium borderline
AMDW01031715.1_FGP001 Alkaloid T3O high pass
AMDW01031869.1_FGP001 Alkaloid T3O medium borderline
AMDW01036617.1_FGP001 Alkaloid T3O medium borderline
AMDW01038693.1_FGP001 Alkaloid T3O medium borderline
AMDW01038999.1_FGP001 Alkaloid T3O medium borderline
AMDW01040136.1_FGP001 Alkaloid T3O medium borderline
KN538682.1_FGP209 Alkaloid T3O medium borderline
KN538687.1_FGP132 Alkaloid T3O medium borderline
KN538691.1_FGP143 Alkaloid T3O medium borderline
KN538691.1_FGP150 Alkaloid T3O medium borderline
KN538693.1_FGP019 Alkaloid T3O low borderline
KN538719.1_FGP040 Alkaloid T3O medium pass