PlantSME Plant secondary metabolism enzyme database

Oryza longistaminata (oryza_longistaminata)

Imported from atlas release summary for Oryza longistaminata.

2086
Candidate Protein Records
1740
Pathway-Level Records
4443
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 461 19 BAHD (151) View species results
Alkaloid pathway 386 24 7DLGT (74) View species results
Phenylpropanoid pathway 383 13 POD (164) View species results
Flavonoid pathway 221 13 UFGT (108) View species results
Rosmarinic acid pathway 180 7 C4H (110) View species results
Steroid pathway 109 14 SMT1/SMT2/SMT3 (45) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1898 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 267 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
KN539165.1_FGP007 Alkaloid T3O medium pass
KN539235.1_FGP001 Alkaloid T3O medium borderline
KN539240.1_FGP012 Alkaloid T3O low borderline
KN539245.1_FGP002 Alkaloid T3O medium borderline
KN539245.1_FGP007 Alkaloid T3O medium borderline
KN539245.1_FGP013 Alkaloid T3O medium borderline
KN539245.1_FGP014 Alkaloid T3O medium borderline
KN539270.1_FGP006 Alkaloid T3O medium borderline
KN539314.1_FGP004 Alkaloid T3O low borderline
KN539315.1_FGP008 Alkaloid T3O medium borderline
KN539350.1_FGP007 Alkaloid T3O medium borderline
KN539383.1_FGP003 Alkaloid T3O medium borderline
KN539383.1_FGP006 Alkaloid T3O medium borderline
KN539383.1_FGP011 Alkaloid T3O medium borderline
KN539400.1_FGP017 Alkaloid T3O medium pass
KN539400.1_FGP020 Alkaloid T3O medium pass
KN539407.1_FGP001 Alkaloid T3O medium borderline
KN539407.1_FGP002 Alkaloid T3O medium borderline
KN539407.1_FGP004 Alkaloid T3O medium borderline
KN539407.1_FGP005 Alkaloid T3O medium borderline
KN539407.1_FGP007 Alkaloid T3O medium borderline
KN539407.1_FGP008 Alkaloid T3O medium borderline
KN539407.1_FGP009 Alkaloid T3O medium borderline
KN539407.1_FGP012 Alkaloid T3O medium borderline
KN539407.1_FGP013 Alkaloid T3O medium borderline
KN539421.1_FGP011 Alkaloid T3O medium pass
KN539449.1_FGP003 Alkaloid T3O medium pass
KN539466.1_FGP004 Alkaloid T3O medium borderline
KN539468.1_FGP010 Alkaloid T3O medium borderline
KN539470.1_FGP013 Alkaloid T3O medium borderline
KN539502.1_FGP004 Alkaloid T3O medium borderline
KN539502.1_FGP007 Alkaloid T3O medium borderline
KN539528.1_FGP003 Alkaloid T3O low borderline
KN539528.1_FGP006 Alkaloid T3O medium pass
KN539528.1_FGP011 Alkaloid T3O low borderline
KN539528.1_FGP012 Alkaloid T3O low borderline
KN539528.1_FGP015 Alkaloid T3O medium pass
KN539535.1_FGP004 Alkaloid T3O medium borderline
KN539535.1_FGP006 Alkaloid T3O medium borderline
KN539561.1_FGP003 Alkaloid T3O medium pass
KN539561.1_FGP006 Alkaloid T3O medium pass
KN539561.1_FGP010 Alkaloid T3O medium pass
KN539577.1_FGP001 Alkaloid T3O medium borderline
KN539577.1_FGP006 Alkaloid T3O medium borderline
KN539595.1_FGP001 Alkaloid T3O medium pass
KN539595.1_FGP002 Alkaloid T3O medium pass
KN539595.1_FGP006 Alkaloid T3O medium pass
KN539620.1_FGP004 Alkaloid T3O medium borderline
KN539631.1_FGP007 Alkaloid T3O medium borderline
KN539675.1_FGP004 Alkaloid T3O medium pass