PlantSME Plant secondary metabolism enzyme database

Oryza longistaminata (oryza_longistaminata)

Imported from atlas release summary for Oryza longistaminata.

1740
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 461 19 BAHD (151) View species results
Alkaloid pathway 386 24 7DLGT (74) View species results
Phenylpropanoid pathway 383 13 POD (164) View species results
Flavonoid pathway 221 13 UFGT (108) View species results
Rosmarinic acid pathway 180 7 C4H (110) View species results
Steroid pathway 109 14 SMT1/SMT2/SMT3 (45) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1898 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 267 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
KN539502.1_FGP004 Steroid BR6OX2/CYP85A2 low borderline
KN539502.1_FGP007 Steroid BR6OX2/CYP85A2 low borderline
KN539528.1_FGP006 Steroid BR6OX2/CYP85A2 low borderline
KN539528.1_FGP015 Steroid BR6OX2/CYP85A2 low borderline
KN539535.1_FGP004 Steroid BR6OX2/CYP85A2 low borderline
KN539561.1_FGP010 Steroid BR6OX2/CYP85A2 low borderline
KN539577.1_FGP001 Steroid BR6OX2/CYP85A2 low borderline
KN539577.1_FGP006 Steroid BR6OX2/CYP85A2 low borderline
KN539620.1_FGP004 Steroid BR6OX2/CYP85A2 low borderline
KN539620.1_FGP006 Steroid BR6OX2/CYP85A2 low borderline
KN539715.1_FGP006 Steroid BR6OX2/CYP85A2 low borderline
KN539747.1_FGP004 Steroid BR6OX2/CYP85A2 low borderline
KN539747.1_FGP005 Steroid BR6OX2/CYP85A2 low borderline
KN539747.1_FGP011 Steroid BR6OX2/CYP85A2 low borderline
KN539747.1_FGP012 Steroid BR6OX2/CYP85A2 low borderline
KN539776.1_FGP002 Steroid BR6OX2/CYP85A2 low borderline
KN539794.1_FGP008 Steroid BR6OX2/CYP85A2 low borderline
KN539809.1_FGP001 Steroid BR6OX2/CYP85A2 low borderline
KN539809.1_FGP006 Steroid BR6OX2/CYP85A2 low borderline
KN539858.1_FGP004 Steroid BR6OX2/CYP85A2 low borderline
KN539921.1_FGP003 Steroid BR6OX2/CYP85A2 low borderline
KN539921.1_FGP006 Steroid BR6OX2/CYP85A2 low borderline
KN539921.1_FGP008 Steroid BR6OX2/CYP85A2 low borderline
KN540042.1_FGP003 Steroid BR6OX2/CYP85A2 low borderline
KN540042.1_FGP004 Steroid BR6OX2/CYP85A2 low borderline
KN540178.1_FGP003 Steroid BR6OX2/CYP85A2 low borderline
KN540202.1_FGP002 Steroid BR6OX2/CYP85A2 low borderline
KN540204.1_FGP001 Steroid BR6OX2/CYP85A2 low borderline
KN540275.1_FGP003 Steroid BR6OX2/CYP85A2 low borderline
KN540321.1_FGP001 Steroid BR6OX2/CYP85A2 low borderline
KN540483.1_FGP002 Steroid BR6OX2/CYP85A2 low borderline
KN540569.1_FGP002 Steroid BR6OX2/CYP85A2 low borderline
KN540569.1_FGP003 Steroid BR6OX2/CYP85A2 low borderline
KN540604.1_FGP002 Steroid BR6OX2/CYP85A2 low borderline
KN540648.1_FGP001 Steroid BR6OX2/CYP85A2 low borderline
KN540753.1_FGP004 Steroid BR6OX2/CYP85A2 low borderline
KN540899.1_FGP002 Steroid BR6OX2/CYP85A2 low borderline
KN540904.1_FGP004 Steroid BR6OX2/CYP85A2 low borderline
KN540950.1_FGP001 Steroid BR6OX2/CYP85A2 low borderline
KN541466.1_FGP001 Steroid BR6OX2/CYP85A2 low borderline
KN541559.1_FGP003 Steroid BR6OX2/CYP85A2 low borderline
KN541811.1_FGP001 Steroid BR6OX2/CYP85A2 low borderline
KN541978.1_FGP001 Steroid BR6OX2/CYP85A2 low borderline
KN541985.1_FGP001 Steroid BR6OX2/CYP85A2 low borderline
KN542033.1_FGP002 Steroid BR6OX2/CYP85A2 low borderline
KN546147.1_FGP001 Steroid BR6OX2/CYP85A2 low borderline
AMDW01031265.1_FGP001 Steroid CAS medium pass
AMDW01036335.1_FGP001 Steroid CAS medium pass
AMDW01056164.1_FGP001 Steroid CAS medium pass
AMDW01077259.1_FGP001 Steroid CAS medium pass