PlantSME Plant secondary metabolism enzyme database

Oryza longistaminata (oryza_longistaminata)

Imported from atlas release summary for Oryza longistaminata.

1740
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 461 19 BAHD (151) View species results
Alkaloid pathway 386 24 7DLGT (74) View species results
Phenylpropanoid pathway 383 13 POD (164) View species results
Flavonoid pathway 221 13 UFGT (108) View species results
Rosmarinic acid pathway 180 7 C4H (110) View species results
Steroid pathway 109 14 SMT1/SMT2/SMT3 (45) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1898 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 267 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
KN543277.1_FGP001 Steroid CAS low borderline
KN543308.1_FGP001 Steroid CAS medium pass
KN545492.1_FGP001 Steroid CAS medium pass
AMDW01034039.1_FGP001 Steroid CPD/CYP90A1 low borderline
AMDW01040269.1_FGP001 Steroid CPD/CYP90A1 medium borderline
KN538739.1_FGP018 Steroid CPD/CYP90A1 low borderline
KN538768.1_FGP053 Steroid CPD/CYP90A1 medium borderline
KN538827.1_FGP008 Steroid CPD/CYP90A1 medium borderline
KN539320.1_FGP001 Steroid CPD/CYP90A1 low borderline
KN539439.1_FGP003 Steroid CPD/CYP90A1 low borderline
KN539439.1_FGP006 Steroid CPD/CYP90A1 low borderline
KN539528.1_FGP003 Steroid CPD/CYP90A1 low borderline
KN539528.1_FGP012 Steroid CPD/CYP90A1 low borderline
KN539595.1_FGP001 Steroid CPD/CYP90A1 medium borderline
KN540024.1_FGP005 Steroid CPD/CYP90A1 low borderline
KN541555.1_FGP002 Steroid CPD/CYP90A1 medium borderline
KN542124.1_FGP001 Steroid CPD/CYP90A1 medium borderline
KN542591.1_FGP001 Steroid CPD/CYP90A1 medium borderline
KN539036.1_FGP002 Steroid CPI1 high pass
AMDW01033660.1_FGP001 Steroid CYP51G1 medium borderline
AMDW01036620.1_FGP001 Steroid CYP51G1 medium borderline
AMDW01038999.1_FGP001 Steroid CYP51G1 medium borderline
AMDW01039644.1_FGP001 Steroid CYP51G1 medium pass
KN538684.1_FGP105 Steroid CYP51G1 medium borderline
KN538693.1_FGP019 Steroid CYP51G1 medium borderline
KN538768.1_FGP046 Steroid CYP51G1 medium borderline
KN538770.1_FGP038 Steroid CYP51G1 medium borderline
KN539031.1_FGP007 Steroid CYP51G1 medium borderline
KN539031.1_FGP013 Steroid CYP51G1 medium borderline
KN539099.1_FGP002 Steroid CYP51G1 medium pass
KN539099.1_FGP007 Steroid CYP51G1 medium borderline
KN539245.1_FGP007 Steroid CYP51G1 medium borderline
KN539245.1_FGP014 Steroid CYP51G1 medium borderline
KN539248.1_FGP004 Steroid CYP51G1 medium pass
KN539383.1_FGP003 Steroid CYP51G1 medium borderline
KN539383.1_FGP006 Steroid CYP51G1 medium borderline
KN539383.1_FGP011 Steroid CYP51G1 medium borderline
KN539407.1_FGP005 Steroid CYP51G1 medium borderline
KN539407.1_FGP007 Steroid CYP51G1 medium borderline
KN539610.1_FGP006 Steroid CYP51G1 medium borderline
KN539747.1_FGP001 Steroid CYP51G1 medium borderline
KN539747.1_FGP002 Steroid CYP51G1 medium borderline
KN539747.1_FGP009 Steroid CYP51G1 medium borderline
KN539776.1_FGP001 Steroid CYP51G1 medium borderline
KN539776.1_FGP006 Steroid CYP51G1 medium borderline
KN539873.1_FGP002 Steroid CYP51G1 medium borderline
KN540042.1_FGP001 Steroid CYP51G1 medium borderline
KN540273.1_FGP001 Steroid CYP51G1 medium borderline
KN540273.1_FGP004 Steroid CYP51G1 medium borderline
KN540875.1_FGP002 Steroid CYP51G1 medium borderline